RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 CCDC140Q96MF4 163 aa13.36□□□□□ -0.27
TMTC3-202ENST00000547034 ZFYVE26Q68DK2 2539 aa13.36□□□□□ -0.27
TMTC3-202ENST00000547034 TRAV41A0A0B4J266 112 aa13.36□□□□□ -0.27
TMTC3-202ENST00000547034 IFITM10A6NMD0 228 aa13.36□□□□□ -0.27
TMTC3-202ENST00000547034 J3QLI3 93 aa13.36□□□□□ -0.27
TMTC3-202ENST00000547034 M0QZK8 103 aa13.36□□□□□ -0.27
TMTC3-202ENST00000547034 BEX4Q9NWD9 120 aaPredicted RBP13.36□□□□□ -0.27
TMTC3-202ENST00000547034 PITPNC1Q9UKF7 332 aa13.36□□□□□ -0.27
TMTC3-202ENST00000547034 SMIM27A0A1W2PRY6 76 aa13.35□□□□□ -0.27
TMTC3-202ENST00000547034 MEOX2P50222 304 aa13.35□□□□□ -0.27
TMTC3-202ENST00000547034 LOXL1Q08397 574 aaPredicted RBP13.35□□□□□ -0.27
TMTC3-202ENST00000547034 NHLRC2Q8NBF2 726 aa13.35□□□□□ -0.27
TMTC3-202ENST00000547034 SOX21Q9Y651 276 aaPredicted RBP13.35□□□□□ -0.27
TMTC3-202ENST00000547034 ASH1LQ9NR48 2969 aaKnown RBP13.34□□□□□ -0.27
TMTC3-202ENST00000547034 TRBV7-1A0A0A6YYK4 115 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 IGHG2P01859 326 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 S100A7P31151 101 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 LRRC75A-AS1Q8N1F1 130 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 HIST3H2BBQ8N257 126 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 EEF1AKMT3Q96AZ1 226 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 ZFAND3Q9H8U3 227 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.34□□□□□ -0.272e-8■■■■■ 31.6
TMTC3-202ENST00000547034 FAM223BA6NKX1 122 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 H3BUX3 64 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 IGLV2-11P01706 119 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 SMIM6P0DI80 62 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 GPR183P32249 361 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 FAM223AQ8IWN6 122 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 EXOC3-AS1Q8N2X6 119 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 C17orf77Q96MU5 243 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 RABAC1Q9UI14 185 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 MYO18BQ8IUG5 2567 aa13.34□□□□□ -0.27
TMTC3-202ENST00000547034 SPG11Q96JI7 2443 aa13.33□□□□□ -0.27
TMTC3-202ENST00000547034 BMPR1BO00238 502 aa13.33□□□□□ -0.28
TMTC3-202ENST00000547034 RPL7P18124 248 aaKnown RBP13.33□□□□□ -0.28
TMTC3-202ENST00000547034 Q86TA4 180 aa13.33□□□□□ -0.28
TMTC3-202ENST00000547034 ZNF492Q9P255 531 aa13.33□□□□□ -0.28
TMTC3-202ENST00000547034 TRAPPC1Q9Y5R8 145 aa13.33□□□□□ -0.28
TMTC3-202ENST00000547034 ZNF705GA8MUZ8 300 aaPredicted RBP13.32□□□□□ -0.28
TMTC3-202ENST00000547034 CLEC3BP05452 202 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 KRTAP10-9P60411 292 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 OR8I2Q8N0Y5 310 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 ARL6IP6Q8N6S5 226 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 NUDT10Q8NFP7 164 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 CMTM2Q8TAZ6 248 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 NUDT11Q96G61 164 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 RPH3ALQ9UNE2 315 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 H3BUA1 57 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 ZNF253O75346 499 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 GFI1BQ5VTD9 330 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 TOMM20LQ6UXN7 152 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 TMEM75Q8N9X5 138 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 C12orf57Q99622 126 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 ZNF580Q9UK33 172 aa13.32□□□□□ -0.28
TMTC3-202ENST00000547034 GATCO43716 136 aaKnown RBP13.31□□□□□ -0.28
TMTC3-202ENST00000547034 PPIFP30405 207 aaKnown RBP13.31□□□□□ -0.28
TMTC3-202ENST00000547034 RAB9AP51151 201 aa13.31□□□□□ -0.28
TMTC3-202ENST00000547034 RPL19P84098 196 aaKnown RBP13.31□□□□□ -0.28
TMTC3-202ENST00000547034 DEFB113Q30KQ7 82 aa13.31□□□□□ -0.28
TMTC3-202ENST00000547034 COX19Q49B96 90 aa13.31□□□□□ -0.28
TMTC3-202ENST00000547034 TMEM183AQ8IXX5 376 aa13.31□□□□□ -0.28
TMTC3-202ENST00000547034 PRSS22Q9GZN4 317 aa13.31□□□□□ -0.28
TMTC3-202ENST00000547034 C19orf71A6NCJ1 209 aa13.3□□□□□ -0.28
TMTC3-202ENST00000547034 ATP5G2Q06055 141 aa13.3□□□□□ -0.28
TMTC3-202ENST00000547034 LY6EQ16553 131 aa13.3□□□□□ -0.28
TMTC3-202ENST00000547034 CT83Q5H943 113 aa13.3□□□□□ -0.28
TMTC3-202ENST00000547034 GNB1LQ9BYB4 327 aa13.3□□□□□ -0.28
TMTC3-202ENST00000547034 PSG9Q00887 426 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 CLEC19AQ6UXS0 136 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 SGK494Q96LW2 274 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 MS4A10Q96PG2 267 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 SERTM2A0A1B0GWG4 89 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 XKRY2A2RUG3 117 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 CLPSL1A2RUU4 121 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 IZUMO1RA6ND01 250 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 DIRC3C9JPN6 131 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 FSHBP01225 129 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 GPR61Q9BZJ8 451 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 SERTAD4Q9NUC0 356 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 SMAD5-AS1Q9Y6J3 95 aa13.29□□□□□ -0.28
TMTC3-202ENST00000547034 CR1P17927 2039 aa13.28□□□□□ -0.28
TMTC3-202ENST00000547034 A0A087X0K7 114 aa13.28□□□□□ -0.28
TMTC3-202ENST00000547034 MT-ND6P03923 174 aa13.28□□□□□ -0.28
TMTC3-202ENST00000547034 CBLN1P23435 193 aa13.28□□□□□ -0.28
TMTC3-202ENST00000547034 COL8A1P27658 744 aa13.28□□□□□ -0.28
TMTC3-202ENST00000547034 RELQ04864 619 aaPredicted RBP13.28□□□□□ -0.28
TMTC3-202ENST00000547034 WDR73Q6P4I2 378 aa13.28□□□□□ -0.28
TMTC3-202ENST00000547034 TSKUQ8WUA8 353 aa13.28□□□□□ -0.28
TMTC3-202ENST00000547034 AAMDCQ9H7C9 122 aa13.28□□□□□ -0.28
TMTC3-202ENST00000547034 TRAV8-1A0A0A6YYK1 113 aa13.27□□□□□ -0.28
TMTC3-202ENST00000547034 NPIPB6E9PJ23 425 aa13.27□□□□□ -0.28
TMTC3-202ENST00000547034 K7EQM0 130 aa13.27□□□□□ -0.28
TMTC3-202ENST00000547034 BUB3O43684 328 aa13.27□□□□□ -0.28
TMTC3-202ENST00000547034 PSG3Q16557 428 aa13.27□□□□□ -0.28
TMTC3-202ENST00000547034 C9orf152Q5JTZ5 239 aa13.27□□□□□ -0.28
TMTC3-202ENST00000547034 PRR27Q6MZM9 219 aa13.27□□□□□ -0.28
TMTC3-202ENST00000547034 RASL11AQ6T310 242 aa13.27□□□□□ -0.28
TMTC3-202ENST00000547034 LINC00322Q6ZN03 302 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms