RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 C10orf95Q9H7T3 257 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 PSTPIP2Q9H939 334 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 ARMC1Q9NVT9 282 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 C17orf112F2Z3M2 114 aa0.3□□□□□ -2.36
CCDC38-204ENST00000546816 ERC2-IT1O76042 136 aa0.3□□□□□ -2.36
CCDC38-204ENST00000546816 DYNLT3P51808 116 aa0.3□□□□□ -2.36
CCDC38-204ENST00000546816 EIF5AL1Q6IS14 154 aaKnown RBP0.3□□□□□ -2.36
CCDC38-204ENST00000546816 SPATA8Q6RVD6 105 aa0.3□□□□□ -2.36
CCDC38-204ENST00000546816 LINC00575Q6W349 94 aa0.3□□□□□ -2.36
CCDC38-204ENST00000546816 EXOC3-AS1Q8N2X6 119 aa0.3□□□□□ -2.36
CCDC38-204ENST00000546816 TNFSF18Q9UNG2 199 aa0.3□□□□□ -2.36
CCDC38-204ENST00000546816 MIA2Q96PC5 1412 aa0.3□□□□□ -2.36
CCDC38-204ENST00000546816 MYH7BA7E2Y1 1941 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 OR2T8A6NH00 312 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 F8W1H4 67 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 CST8O60676 142 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 CRHP06850 196 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 CXCL8P10145 99 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 COX7CP15954 63 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 NCALDP61601 193 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 CDK6Q00534 326 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 S100A7AQ86SG5 101 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 POP5Q969H6 163 aaKnown RBP0.29□□□□□ -2.36
CCDC38-204ENST00000546816 RAB37Q96AX2 223 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 MUCL1Q96DR8 90 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 ZC2HC1AQ96GY0 325 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 PRRT1Q99946 306 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 PBOV1Q9GZY1 135 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 PLXNA4Q9HCM2 1894 aa0.29□□□□□ -2.36
CCDC38-204ENST00000546816 ALPK3Q96L96 1907 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 SCN8AQ9UQD0 1980 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 CAMSAP1Q5T5Y3 1602 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 PHRF1Q9P1Y6 1649 aaKnown RBP0.28□□□□□ -2.36
CCDC38-204ENST00000546816 H3BRM9 83 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 M0R233 179 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 IGLV3-1P01715 115 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 OR10J4P0C629 311 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 NFYBP25208 207 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 DHRS4L2Q6PKH6 230 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 TEN1Q86WV5 123 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 OR5AS1Q8N127 324 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 OR5D16Q8NGK9 328 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 ZNF431Q8TF32 576 aaPredicted RBP0.28□□□□□ -2.36
CCDC38-204ENST00000546816 PSMF1Q92530 271 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 GGACTQ9BVM4 153 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 POPDC3Q9HBV1 291 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 PRNDQ9UKY0 176 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 PYCARDQ9ULZ3 195 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 ARL5AQ9Y689 179 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 CASP8AP2Q9UKL3 1982 aa0.28□□□□□ -2.36
CCDC38-204ENST00000546816 MYH10P35580 1976 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 TRAV27A0A087WT01 109 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 DUXBA0A1W2PPF3 345 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 NDUFC2O95298 119 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 RAB5CP51148 216 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 INSL3P51460 131 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 MRPS25P82663 173 aaKnown RBP0.27□□□□□ -2.37
CCDC38-204ENST00000546816 TMED2Q15363 201 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 PXT1Q8NFP0 134 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 OR10AG1Q8NH19 301 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 PPTC7Q8NI37 304 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 CHMP6Q96FZ7 201 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 PHB2Q99623 299 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 TMEM138Q9NPI0 162 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 MED29Q9NX70 200 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 OR52A1Q9UKL2 312 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 ASB4Q9Y574 426 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 CEP164Q9UPV0 1460 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 USP24Q9UPU5 2620 aa0.27□□□□□ -2.37
CCDC38-204ENST00000546816 SNRNP200O75643 2136 aaKnown RBP0.26□□□□□ -2.37
CCDC38-204ENST00000546816 A0A0D9SG42 100 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 K7EIL1 84 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 AIPO00170 330 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 BANF1O75531 89 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 ARF6P62330 175 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 GNG5P63218 68 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 SCGB2B2Q4G0G5 96 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 GLIPR1L1Q6UWM5 242 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 TMEM14EPQ6UXP3 125 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 ARPINQ7Z6K5 226 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 CHCHD1Q96BP2 118 aaKnown RBP0.26□□□□□ -2.37
CCDC38-204ENST00000546816 HYLS1Q96M11 299 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 FRAS1Q86XX4 4008 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 MED12Q93074 2177 aa0.26□□□□□ -2.37
CCDC38-204ENST00000546816 NUP98P52948 1817 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 TRPM1Q7Z4N2 1603 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 G3V2T6 193 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 JMJD7-PLA2G4BH0Y9G9 81 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 PRH1P02810 166 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 TRGC2P03986 189 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 CXCL1P09341 107 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 ARPP19P56211 112 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 OR4K15Q8NH41 348 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 ZHX1-C8orf76Q96EF9 292 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 OR2J1Q9GZK6 312 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 SH3BGRL3Q9H299 93 aa0.25□□□□□ -2.37
CCDC38-204ENST00000546816 CACYBPQ9HB71 228 aaKnown RBP0.25□□□□□ -2.37
CCDC38-204ENST00000546816 LYRM2Q9NU23 88 aaPredicted RBP0.25□□□□□ -2.37
CCDC38-204ENST00000546816 NISCHQ9Y2I1 1504 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 TRAV5A0A0B4J249 113 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms