RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 LOXL3P58215 753 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 OR1N2Q8NGR9 330 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 OR8B2Q96RD0 313 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 C3orf79P0CE67 100 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 FCER1GP30273 86 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 LY6EQ16553 131 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 SPACA3Q8IXA5 215 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 CIARTQ8N365 385 aaPredicted RBP7.94□□□□□ -1.14
TRAF1-203ENST00000546084 KCNS1Q96KK3 526 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 SFXN3Q9BWM7 321 aa7.94□□□□□ -1.14
TRAF1-203ENST00000546084 ZNF324O75467 553 aaPredicted RBP7.93□□□□□ -1.14
TRAF1-203ENST00000546084 C1orf174Q8IYL3 243 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 SPXQ9BT56 116 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 GNB1LQ9BYB4 327 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 RNF114Q9Y508 228 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 KMT2EQ8IZD2 1858 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 A0A1W2PS18 150 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 HLA-DQA1P01909 254 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 PSG1P11464 419 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 V9GYV3 84 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 FASNP49327 2511 aaKnown RBP7.93□□□□□ -1.14
TRAF1-203ENST00000546084 BMPR1BO00238 502 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 TIMM23O14925 209 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 VDAC2P45880 294 aaPredicted RBP7.93□□□□□ -1.14
TRAF1-203ENST00000546084 PPOXP50336 477 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 WT1-ASQ06250 92 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 CD69Q07108 199 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 MBNL2Q5VZF2 373 aaKnown RBP7.93□□□□□ -1.14
TRAF1-203ENST00000546084 Q8N7P7 452 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 STPG4Q8N801 248 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 C1orf162Q8NEQ5 155 aaPredicted RBP7.93□□□□□ -1.14
TRAF1-203ENST00000546084 OR4F17Q8NGA8 305 aa7.93□□□□□ -1.14
TRAF1-203ENST00000546084 GGTLC3B5MD39 225 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 LINC00310P59036 64 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 OR8B3Q8NGG8 313 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 OR52E5Q8NH55 327 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 IGKV1OR2-108A0A075B7D4 117 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 TRBV9A0A0B4J1U6 114 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 CX3CL1P78423 397 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 KHDC1LQ5JSQ8 128 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 PERPQ96FX8 193 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 YAE1D1Q9NRH1 226 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 MRPL36Q9P0J6 103 aaKnown RBP7.92□□□□□ -1.14
TRAF1-203ENST00000546084 HIGD1AQ9Y241 93 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 UFC1Q9Y3C8 167 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 OR2T8A6NH00 312 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 CSN1S1P47710 185 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 UQCRFS1P47985 274 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 PRCDQ00LT1 54 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 ZNF788Q6ZQV5 615 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 C18orf15Q96N68 181 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 CHRDL1Q9BU40 450 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 CDC42EP3Q9UKI2 254 aa7.92□□□□□ -1.14
TRAF1-203ENST00000546084 TRAV9-1A0A075B6T8 112 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 C9JCJ5 164 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 E7EQL1 145 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 PEX7O00628 323 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 OR5AL1P0C617 328 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 Q0VG73 95 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 TMEM116Q8NCL8 245 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 FNDC4Q9H6D8 234 aaPredicted RBP7.91□□□□□ -1.14
TRAF1-203ENST00000546084 GEMIN7Q9H840 131 aaKnown RBP7.91□□□□□ -1.14
TRAF1-203ENST00000546084 LINC00312Q9Y6C7 94 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 SMG1Q96Q15 3661 aaKnown RBP7.91□□□□□ -1.14
TRAF1-203ENST00000546084 A0A1W2PPI3 338 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 TM4SF20Q53R12 229 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 MBD3L4A6NDZ8 208 aaPredicted RBP7.91□□□□□ -1.14
TRAF1-203ENST00000546084 MBD3L3A6NE82 208 aaPredicted RBP7.91□□□□□ -1.14
TRAF1-203ENST00000546084 MBD3L5A6NJ08 208 aaPredicted RBP7.91□□□□□ -1.14
TRAF1-203ENST00000546084 H0YJW9 148 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 TMEM136Q6ZRR5 245 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 MBD3L2Q8NHZ7 208 aaPredicted RBP7.91□□□□□ -1.14
TRAF1-203ENST00000546084 ZNF462Q96JM2 2506 aa7.91□□□□□ -1.14
TRAF1-203ENST00000546084 TMEM178BH3BS89 294 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 IGLC2P0DOY2 106 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 IGLC3P0DOY3 106 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 RNASE2P10153 161 aaKnown RBP7.9□□□□□ -1.14
TRAF1-203ENST00000546084 Q6ZS92 163 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 FA2HQ7L5A8 372 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 TMEM219Q86XT9 240 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 Q8TAT8 98 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 TSKUQ8WUA8 353 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 ORAOV1Q8WV07 137 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 CLEC7AQ9BXN2 247 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 KLK15Q9H2R5 256 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 AAMDCQ9H7C9 122 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 ASCL5Q7RTU5 278 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 C5orf17Q8NAS9 161 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 NAA38Q9BRA0 125 aaKnown RBP7.9□□□□□ -1.14
TRAF1-203ENST00000546084 OSTCQ9NRP0 149 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 CTSZQ9UBR2 303 aa7.9□□□□□ -1.14
TRAF1-203ENST00000546084 SPRY2O43597 315 aa7.9□□□□□ -1.15
TRAF1-203ENST00000546084 IGKV3-20P01619 116 aa7.9□□□□□ -1.15
TRAF1-203ENST00000546084 EIF4EBP1Q13541 118 aaPredicted RBP7.9□□□□□ -1.15
TRAF1-203ENST00000546084 COX19Q49B96 90 aa7.9□□□□□ -1.15
TRAF1-203ENST00000546084 C17orf77Q96MU5 243 aa7.9□□□□□ -1.15
TRAF1-203ENST00000546084 RAB1BQ9H0U4 201 aa7.9□□□□□ -1.15
TRAF1-203ENST00000546084 Q9H3A6 140 aa7.9□□□□□ -1.15
TRAF1-203ENST00000546084 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.15
TRAF1-203ENST00000546084 ADAMTS20P59510 1910 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms