RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ZNF48Q96MX3 618 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-218ENST00000545889 MAP1LC3AQ9H492 121 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 TBL2Q9Y4P3 447 aaKnown RBP7.07□□□□□ -1.28
CLIP1-218ENST00000545889 FRYLO94915 3013 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 APCSP02743 223 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 PAX1P15863 534 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 TMEM155Q4W5P6 130 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 ASCL4Q6XD76 172 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 RNF144BQ7Z419 303 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 MRAPQ8TCY5 172 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 CACNG8Q8WXS5 425 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 HSPB8Q9UJY1 196 aa7.07□□□□□ -1.28
CLIP1-218ENST00000545889 TRBV20OR9-2A0A075B6H5 130 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 IGKV1-9A0A0C4DH69 117 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 ZNF503-AS2A6NEH8 195 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 K7EP13 123 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 PPBPP02775 128 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 ZNF688P0C7X2 276 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 TCTAP57738 103 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 C15orf32Q32M92 178 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 PLPPR1Q8TBJ4 325 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 CRYBB3P26998 211 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 CACNG7P62955 275 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 IL17RELQ6ZVW7 336 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 SLC50A1Q9BRV3 221 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 TLN2Q9Y4G6 2542 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 HLA-DRB1P01911 266 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 UCP1P25874 307 aa7.06□□□□□ -1.28
CLIP1-218ENST00000545889 EGR1P18146 543 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 SLAQ13239 276 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 MORN2Q502X0 79 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 PGLYRP4Q96LB8 373 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 SPEGQ15772 3267 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 RBFOX2O43251 390 aaKnown RBP eCLIP7.05□□□□□ -1.283e-7■■■□□ 15.9
CLIP1-218ENST00000545889 SNAI2O43623 268 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 COX6CP09669 75 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 PRTN3P24158 256 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 PAX2Q02962 417 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 MPV17L2Q567V2 206 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 LINC01551Q86U37 167 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 RNF125Q96EQ8 232 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 PLA2G2EQ9NZK7 142 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 DOCK11Q5JSL3 2073 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 LEPP41159 167 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 SRSF4Q08170 494 aaKnown RBP7.05□□□□□ -1.28
CLIP1-218ENST00000545889 PEF1Q9UBV8 284 aaKnown RBP7.05□□□□□ -1.28
CLIP1-218ENST00000545889 ZNF256Q9Y2P7 627 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-218ENST00000545889 IGHV2-70DA0A0C4DH43 119 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 UPK2O00526 184 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 TMEM200BQ69YZ2 307 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 OR52E5Q8NH55 327 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 SPSB4Q96A44 273 aa7.05□□□□□ -1.28
CLIP1-218ENST00000545889 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
CLIP1-218ENST00000545889 ARL14EPLP0DKL9 152 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 PVRIGQ6DKI7 326 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 Q8NA96 180 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 J3QLI3 93 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 ADMP35318 185 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 MEF2BQ02080 365 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-218ENST00000545889 FAM71F2Q6NXP2 309 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 ZC2HC1AQ96GY0 325 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 UBE2E2Q96LR5 201 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 PRADC1Q9BSG0 188 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 DKK4Q9UBT3 224 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 MRPS16Q9Y3D3 137 aaKnown RBP7.04□□□□□ -1.28
CLIP1-218ENST00000545889 TRAV26-1A0A087WT03 109 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 C5orf64Q2M2E5 130 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 DEFB113Q30KQ7 82 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 TMEM42Q69YG0 159 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 Q6ZWC4 215 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 COPS9Q8WXC6 57 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 SFRP2Q96HF1 295 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 NRN1Q9NPD7 142 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 ZNF257Q9Y2Q1 563 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 DEFB130BP0DP73 79 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 DEFB130AP0DP74 79 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 SYNJ2BPP57105 145 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 RUSC1-AS1Q66K80 236 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 USMG5Q96IX5 58 aa7.04□□□□□ -1.28
CLIP1-218ENST00000545889 CFAP54Q96N23 3096 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 IGHV1-3A0A0C4DH29 117 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 H7C2G1 150 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 ESDP10768 282 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 LGALS3P17931 250 aaKnown RBP7.03□□□□□ -1.28
CLIP1-218ENST00000545889 LCN12Q6JVE5 192 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 ATP6V0BQ99437 205 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 IGFBP2P18065 325 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 AZU1P20160 251 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 FOXL1Q12952 345 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 SPSB3Q6PJ21 355 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 TRGV11A0A075B6L2 103 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 A0A1B0GW15 77 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 MLNRO43193 412 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 ACTL10Q5JWF8 245 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 MGAQ8IWI9 3026 aa7.03□□□□□ -1.28
CLIP1-218ENST00000545889 ABCA12Q86UK0 2595 aa7.02□□□□□ -1.28
CLIP1-218ENST00000545889 IGHV1-69DA0A0B4J2H0 117 aa7.02□□□□□ -1.28
CLIP1-218ENST00000545889 IGHV1-69P01742 117 aa7.02□□□□□ -1.28
CLIP1-218ENST00000545889 CRYBA4P53673 196 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms