RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 TAF9BQ9HBM6 251 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 OR2S2Q9NQN1 319 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 SAR1AQ9NR31 198 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 CLN6Q9NWW5 311 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 IKZF2Q9UKS7 526 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF257Q9Y2Q1 563 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 LINC00588Q9Y4M8 146 aa1.61□□□□□ -2.15
SNHG1-224ENST00000545688 TRAV2A0A0B4J234 112 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 METTL15A6NJ78 407 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 OR4C45A6NMZ5 311 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF705FA8MVS1 300 aaPredicted RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 F6UB75 175 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 TNFRSF11BO00300 401 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 GABRPO00591 440 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 MRPS14O60783 128 aaKnown RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 OR2J3O76001 311 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 C1QBP02746 253 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 HMGN1P05114 100 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 CTSDP07339 412 aaPredicted RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF688P0C7X2 276 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 UBCP0CG48 685 aaKnown RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF705DP0CH99 300 aaPredicted RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF705BP0CI00 300 aaPredicted RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 ASIPP42127 132 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 UBE2KP61086 200 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 ACTR3P61158 418 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 IFFO1Q0D2I5 559 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 MRPL28Q13084 256 aaKnown RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 CLINT1Q14677 625 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 PLGLAQ15195 96 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 C6orf183Q5T699 404 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 GLT8D1Q68CQ7 371 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 LAMTOR1Q6IAA8 161 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 CLEC19AQ6UXS0 136 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 UBE2DNLQ8IWF7 75 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 C15orf53Q8NAA6 179 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 OR13C9Q8NGT0 318 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 OR10K1Q8NGX5 313 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 OR10R2Q8NGX6 335 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 OR4K15Q8NH41 348 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 OR52N1Q8NH53 320 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF502Q8TBZ5 544 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 PAIP2Q9BPZ3 127 aaKnown RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 C6orf62Q9GZU0 229 aaPredicted RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 VSIRQ9H7M9 311 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 DAZ1Q9NQZ3 744 aaKnown RBP1.6□□□□□ -2.15
SNHG1-224ENST00000545688 GID8Q9NWU2 228 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 COA4Q9NYJ1 87 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 SMPXQ9UHP9 88 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 TBC1D24Q9ULP9 559 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 ST3GAL6Q9Y274 331 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 UFC1Q9Y3C8 167 aa1.6□□□□□ -2.15
SNHG1-224ENST00000545688 TRAV6A0A075B6T7 132 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 A0A087WTM6 91 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 TRBV7-1A0A0A6YYK4 115 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 A0A1W2PQL4 384 aaPredicted RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 SMIM9A6NGZ8 99 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 NDUFAB1O14561 156 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 OR7C1O76099 320 aaPredicted RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 RPP14O95059 124 aaKnown RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 CCNB2O95067 398 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 NAPSAO96009 420 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 MAS1P04201 325 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 KRT8P05787 483 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 SPART-AS1P0CW21 52 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 APELAP0DMC3 54 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 PRB4P10163 310 aaPredicted RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 RAB3BP20337 219 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 MAGOHP61326 146 aaKnown RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 HAMPP81172 84 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 USF2Q15853 346 aaPredicted RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 TTC32Q5I0X7 151 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 NXNL2Q5VZ03 156 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 GID4Q8IVV7 300 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 FAM24BQ8N5W8 94 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 DRAXINQ8NBI3 349 aaPredicted RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 OR51A2Q8NGJ7 313 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 OR5D14Q8NGL3 314 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 TEX47Q8TBZ9 253 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 MRGPRFQ96AM1 343 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 GALMQ96C23 342 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 DGCR14Q96DF8 476 aaKnown RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 ABHD14BQ96IU4 210 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 C16orf45Q96MC5 204 aaPredicted RBP1.59□□□□□ -2.15
SNHG1-224ENST00000545688 SIKE1Q9BRV8 207 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 TTTY10Q9BZA0 68 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 SPACA1Q9HBV2 294 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 TMBIM4Q9HC24 238 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 TMEM14BQ9NUH8 114 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 TRAPPC2LQ9UL33 140 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 LRRC42Q9Y546 428 aa1.59□□□□□ -2.15
SNHG1-224ENST00000545688 IGKV1-6A0A0C4DH72 117 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 IGHV7-4-1A0A0J9YVY3 117 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 TMEM189A5PLL7 270 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 MCRIP1C9JLW8 97 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 ZNF670-ZNF695F2Z2N8 137 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 H7C2Y5 167 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 NDUFA4O00483 81 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 DYNC1I1O14576 645 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms