RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 MUC7Q8TAX7 377 aa8.94□□□□□ -0.98
LTBR-214ENST00000545445 GPR82Q96P67 336 aa8.94□□□□□ -0.98
LTBR-214ENST00000545445 ASCL2Q99929 193 aa8.94□□□□□ -0.98
LTBR-214ENST00000545445 SHANK2-AS3Q9BTD1 123 aa8.94□□□□□ -0.98
LTBR-214ENST00000545445 SLC25A39Q9BZJ4 359 aaPredicted RBP8.94□□□□□ -0.98
LTBR-214ENST00000545445 HELTA6NFD8 242 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 ZNF98A6NK75 572 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 H3BRN7 92 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 TPT1P13693 172 aaKnown RBP8.93□□□□□ -0.98
LTBR-214ENST00000545445 M6PRP20645 277 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 EIF5AL1Q6IS14 154 aaKnown RBP8.93□□□□□ -0.98
LTBR-214ENST00000545445 LCN12Q6JVE5 192 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 C16orf54Q6UWD8 224 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 PATE2Q6UY27 113 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 RBPMS2Q6ZRY4 209 aaKnown RBP8.93□□□□□ -0.98
LTBR-214ENST00000545445 LINC00305Q7Z4B0 112 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 SLC51BQ86UW2 128 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 STOML3Q8TAV4 291 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 TMEM37Q8WXS4 190 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 ST8SIA2Q92186 375 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 DOK5Q9P104 306 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 MLXQ9UH92 298 aa8.93□□□□□ -0.98
LTBR-214ENST00000545445 IGHV3-49A0A0A0MS15 119 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 APOHP02749 345 aaPredicted RBP8.92□□□□□ -0.98
LTBR-214ENST00000545445 SEC11BP0C7V7 166 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 SPP1P10451 314 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 RPL7P18124 248 aaKnown RBP8.92□□□□□ -0.98
LTBR-214ENST00000545445 EDN2P20800 178 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 CD300EQ496F6 205 aaPredicted RBP8.92□□□□□ -0.98
LTBR-214ENST00000545445 BAP18Q8IXM2 172 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 OR8I2Q8N0Y5 310 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 GLMPQ8WWB7 406 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 MRPL32Q9BYC8 188 aaKnown RBP8.92□□□□□ -0.98
LTBR-214ENST00000545445 SLC25A32Q9H2D1 315 aa8.92□□□□□ -0.98
LTBR-214ENST00000545445 IGHV3OR16-13A0A075B7E8 117 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 IGHV3-74A0A0B4J1X5 117 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 IGHV3-66A0A0C4DH42 116 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 TSPAN4O14817 238 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 GALR1P47211 349 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 RHOBP62745 196 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 FAM78BQ5VT40 261 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 FAM90A2PQ658T7 463 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 TCF24Q7RTU0 167 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 UHRF2Q96PU4 802 aa8.91□□□□□ -0.98
LTBR-214ENST00000545445 SPAG8Q99932 426 aaPredicted RBP8.91□□□□□ -0.98
LTBR-214ENST00000545445 PLECQ15149 4684 aaKnown RBP8.9□□□□□ -0.98
LTBR-214ENST00000545445 TRAV2A0A0B4J234 112 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 A0A1W2PPV4 95 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 UMAD1C9J7I0 102 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 MEOX2P50222 304 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 NKX2-5P52952 324 aaPredicted RBP8.9□□□□□ -0.98
LTBR-214ENST00000545445 TAS2R45P59539 299 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 RPL11P62913 178 aaKnown RBP8.9□□□□□ -0.98
LTBR-214ENST00000545445 TMEM41BQ5BJD5 291 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 AKR1C8PQ5T2L2 129 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 SAMD13Q5VXD3 122 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 SIGLEC15Q6ZMC9 328 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 BPIFA4PQ86YQ2 179 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 TMEM61Q8N0U2 210 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 STXBP6Q8NFX7 210 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 OR10G4Q8NGN3 311 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 OR10G9Q8NGN4 311 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 OR10G7Q8NGN6 311 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 SCRT1Q9BWW7 348 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 SH3BGRL3Q9H299 93 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 SLC25A22Q9H936 323 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 FUT9Q9Y231 359 aa8.9□□□□□ -0.98
LTBR-214ENST00000545445 HERC2O95714 4834 aa8.9□□□□□ -0.99
LTBR-214ENST00000545445 GCSAMLQ5JQS6 135 aa8.89□□□□□ -0.99
LTBR-214ENST00000545445 PRR25Q96S07 402 aa8.89□□□□□ -0.99
LTBR-214ENST00000545445 OR4C46A6NHA9 309 aa8.88□□□□□ -0.99
LTBR-214ENST00000545445 DNASE2O00115 360 aaPredicted RBP8.88□□□□□ -0.99
LTBR-214ENST00000545445 RAB5CP51148 216 aa8.88□□□□□ -0.99
LTBR-214ENST00000545445 CMC4P56277 68 aaPredicted RBP8.88□□□□□ -0.99
LTBR-214ENST00000545445 LEMD1Q68G75 181 aa8.88□□□□□ -0.99
LTBR-214ENST00000545445 PHYHIPLQ96FC7 376 aa8.88□□□□□ -0.99
LTBR-214ENST00000545445 ACTR3CQ9C0K3 210 aaPredicted RBP8.88□□□□□ -0.99
LTBR-214ENST00000545445 SEPSECSQ9HD40 501 aaKnown RBP8.88□□□□□ -0.99
LTBR-214ENST00000545445 NRN1Q9NPD7 142 aa8.88□□□□□ -0.99
LTBR-214ENST00000545445 TMEM14CQ9P0S9 112 aa8.88□□□□□ -0.99
LTBR-214ENST00000545445 ZNF256Q9Y2P7 627 aaPredicted RBP8.88□□□□□ -0.99
LTBR-214ENST00000545445 RFNGQ9Y644 331 aa8.88□□□□□ -0.99
LTBR-214ENST00000545445 A0A087X0K7 114 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 ZNF785A8K8V0 405 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 BOLA2-SMG1P6H3BVE0 249 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 GP9P14770 177 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 ATF4P18848 351 aaPredicted RBP8.87□□□□□ -0.99
LTBR-214ENST00000545445 CDC34P49427 236 aaPredicted RBP8.87□□□□□ -0.99
LTBR-214ENST00000545445 RAB2AP61019 212 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 GUCA2BQ16661 112 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 GUK1Q16774 197 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 KHDC3LQ587J8 217 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 ZFAND6Q6FIF0 208 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 DPPA3Q6W0C5 159 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 PQLC2Q6ZP29 291 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 MIR17HGQ75NE6 70 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 RPP25LQ8N5L8 163 aaKnown RBP8.87□□□□□ -0.99
LTBR-214ENST00000545445 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
LTBR-214ENST00000545445 RPRMQ9NS64 109 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms