RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 H3BRM9 83 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 J3KRW8 73 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 COL8A2P25067 703 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 VMO1Q7Z5L0 202 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 C8orf31Q8N9H6 132 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 NUP35Q8NFH5 326 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 DDB2Q92466 427 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 CCL19Q99731 98 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 M0R1W7 72 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 TCRAP04437 139 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 P0C879 139 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 ZNF295-AS1Q8N0V1 137 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 C11orf52Q96A22 123 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 IFI27L1Q96BM0 104 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 SRSF8Q9BRL6 282 aaKnown RBP4.67□□□□□ -1.66
VPS50-220ENST00000544910 SCRT1Q9BWW7 348 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 C11orf68Q9H3H3 251 aaKnown RBP4.67□□□□□ -1.66
VPS50-220ENST00000544910 GEMIN7Q9H840 131 aaKnown RBP4.67□□□□□ -1.66
VPS50-220ENST00000544910 V9GYV3 84 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 ARID1AO14497 2285 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 FER1L5A0AVI2 2057 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 TOMM40O96008 361 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 SRSF1Q07955 248 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS50-220ENST00000544910 EIF4EBP1Q13541 118 aaPredicted RBP4.67□□□□□ -1.66
VPS50-220ENST00000544910 THAP8Q8NA92 274 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 SMIM27A0A1W2PRY6 76 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 K7EN84 100 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 PRR20EP86478 221 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 PRR20CP86479 221 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 PRR20DP86480 221 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 PRR20BP86481 221 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 PRR20AP86496 221 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 KIR3DS1Q14943 382 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 BCL6BQ8N143 479 aaPredicted RBP4.67□□□□□ -1.66
VPS50-220ENST00000544910 FER1L6-AS1Q8NA97 138 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 PSG8Q9UQ74 426 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 LSM4Q9Y4Z0 139 aaKnown RBP4.67□□□□□ -1.66
VPS50-220ENST00000544910 KMT2EQ8IZD2 1858 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 SRRM4A7MD48 611 aaKnown RBP4.67□□□□□ -1.66
VPS50-220ENST00000544910 LOXP28300 417 aaPredicted RBP4.67□□□□□ -1.66
VPS50-220ENST00000544910 CACNG7P62955 275 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 TMEM95Q3KNT9 176 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 MEIG1Q5JSS6 88 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 KLK15Q9H2R5 256 aa4.67□□□□□ -1.66
VPS50-220ENST00000544910 MUC21A0A0G2JKD1 596 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 MUC21A0A140T8X8 626 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 GHRHP01286 108 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 CNTFRP26992 372 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 YPEL3P61236 119 aaPredicted RBP4.66□□□□□ -1.66
VPS50-220ENST00000544910 KLRD1Q13241 179 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 ORMDL2Q53FV1 153 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 PRR30Q53SZ7 412 aaPredicted RBP4.66□□□□□ -1.66
VPS50-220ENST00000544910 KHDC1LQ5JSQ8 128 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 MUC21Q5SSG8 566 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 CLEC2AQ6UVW9 174 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 GFRA4Q9GZZ7 299 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.66□□□□□ -1.66
VPS50-220ENST00000544910 CGB1A6NKQ9 187 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 GGTLC3B5MD39 225 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 H7C1H1 209 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 NDUFA3O95167 84 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 NPPCP23582 126 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 CDKN1AP38936 164 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 RPL15P61313 204 aaKnown RBP4.66□□□□□ -1.66
VPS50-220ENST00000544910 ADAMTSL5Q6ZMM2 481 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 SEM1Q6ZVN7 128 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 ASCC3Q8N3C0 2202 aaKnown RBP4.66□□□□□ -1.66
VPS50-220ENST00000544910 F8W1H4 67 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 CD24P25063 80 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 ATXN8Q156A1 80 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 TNRC6BQ9UPQ9 1833 aaKnown RBP4.66□□□□□ -1.66
VPS50-220ENST00000544910 IGHV3-66A0A0C4DH42 116 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 IGLC2P0DOY2 106 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 IGLC3P0DOY3 106 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 CR1LQ2VPA4 569 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 KLF17Q5JT82 389 aaPredicted RBP4.66□□□□□ -1.66
VPS50-220ENST00000544910 Q86TA4 180 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 EXOC3-AS1Q8N2X6 119 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 KIR3DL3Q8N743 410 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 CITED1Q99966 193 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 CABIN1Q9Y6J0 2220 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 UTRNP46939 3433 aa4.66□□□□□ -1.66
VPS50-220ENST00000544910 C9orf118A6NHY6 69 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 DIAPH2-AS1Q14236 149 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 DAZAP2Q15038 168 aaPredicted RBP4.65□□□□□ -1.66
VPS50-220ENST00000544910 EBLN2Q6P2I7 272 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 CLEC19AQ6UXS0 136 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 ZNF492Q9P255 531 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 MOB4Q9Y3A3 225 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 PSG3Q16557 428 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 MINOS1Q5TGZ0 78 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 PYGO2Q9BRQ0 406 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 ERG28Q9UKR5 140 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 MINOS1-NBL1R4GNA1 71 aa4.65□□□□□ -1.66
VPS50-220ENST00000544910 IGHV3OR16-10A0A075B7F0 116 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 A0A087X0K7 114 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 K7ENP7 123 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 K7EP13 123 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 UBE2L6O14933 153 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms