RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	TFPI2	P48307	235 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	BCAP31	P51572	246 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	WNT4	P56705	351 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	ST3GAL4	Q11206	333 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	SPCS2	Q15005	226 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	RBMY1F	Q15415	496 aa	Known RBP	4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	HSD17B12	Q53GQ0	312 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	MORN3	Q6PF18	240 aa	Predicted RBP	4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585		Q6ZR54	194 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585		Q6ZS49	121 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	VKORC1L1	Q8N0U8	176 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	OR4S2	Q8NH73	311 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	RASL10A	Q92737	203 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	PGLYRP4	Q96LB8	373 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	HSD17B10	Q99714	261 aa	Known RBP	4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	COMMD5	Q9GZQ3	224 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	BET1L	Q9NYM9	111 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	RAB22A	Q9UL26	194 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	PRELID1	Q9Y255	219 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	RBMX2	Q9Y388	322 aa	Known RBP	4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	TNFRSF18	Q9Y5U5	241 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	HECTD4	Q9Y4D8	3996 aa		4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	DYNC1H1	Q14204	4646 aa	Known RBP	4.28	□□□□□ -1.72
CPSF7-222	ENST00000544585	DNAH11	Q96DT5	4516 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	TRAV2	A0A0B4J234	112 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	TEX46	H3BTG2	121 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	GOSR2	O14653	212 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	MYL12B	O14950	172 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	REG1A	P05451	166 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	EIF4E	P06730	217 aa	Known RBP	4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	SERPINE2	P07093	398 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	CTSG	P08311	255 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	TRAPPC2	P0DI81	140 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	TRAPPC2B	P0DI82	140 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	GADD45A	P24522	165 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	PSMB9	P28065	219 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	S100A5	P33763	92 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	TALDO1	P37837	337 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR2B8P	P59922	312 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	RPL30	P62888	115 aa	Known RBP	4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	C12orf74	Q32Q52	190 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	UBE2U	Q5VVX9	321 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	UBE2DNL	Q8IWF7	75 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	DYNC2LI1	Q8TCX1	351 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	GLYATL2	Q8WU03	294 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	FAM3D	Q96BQ1	224 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR10C1	Q96KK4	312 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	ATP5S	Q99766	215 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	VGLL1	Q99990	258 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	RNF167	Q9H6Y7	350 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	ACOT13	Q9NPJ3	140 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	CLEC5A	Q9NY25	188 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	C21orf62	Q9NYP8	219 aa		4.27	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGLV2-18	A0A075B6J9	118 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	LINC00854	A0A1B0GVQ3	168 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGLC7	A0M8Q6	106 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585		J3QRK9	145 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	UPK2	O00526	184 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	PPP1R2P9	O14990	202 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	NUPL2	O15504	423 aa	Known RBP	4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	ZNF207	O43670	478 aa	Known RBP	4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	YIF1A	O95070	293 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	HPRT1	P00492	218 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	CD74	P04233	296 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	UCHL1	P09936	223 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	DEFB131A	P59861	70 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	RAB11B	Q15907	218 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	TIMM50	Q3ZCQ8	353 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585		Q56UQ5	140 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585		Q6ZN92	141 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	TCF24	Q7RTU0	167 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR10R2	Q8NGX6	335 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	MCFD2	Q8NI22	146 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	GPX8	Q8TED1	209 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	SOST	Q9BQB4	213 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	DCSTAMP	Q9H295	470 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	HRASLS	Q9HDD0	168 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	TMEM14B	Q9NUH8	114 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	FKBP14	Q9NWM8	211 aa		4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	CCDC59	Q9P031	241 aa	Known RBP	4.26	□□□□□ -1.73
CPSF7-222	ENST00000544585	DNAH17	Q9UFH2	4485 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	IGKV3-7	A0A075B6H7	116 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.25	□□□□□ -1.73	4e-7	■□□□□ 10.3
CPSF7-222	ENST00000544585	UPK1B	O75841	260 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	ARL6IP5	O75915	188 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	S100A9	P06702	114 aa	Known RBP	4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	SPART-AS1	P0CW21	52 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	OR13C7	P0DN81	318 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	NQO2	P16083	231 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	DTYMK	P23919	212 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	TAS2R31	P59538	309 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	VBP1	P61758	197 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	NUTF2	P61970	127 aa	Known RBP	4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	NCS1	P62166	190 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	CXCL6	P80162	114 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	INSL4	Q14641	139 aa		4.25	□□□□□ -1.73
CPSF7-222	ENST00000544585	MSMO1	Q15800	293 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms