RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 RPL7P18124 248 aaKnown RBP7.28□□□□□ -1.24
YBX3-215ENST00000544504 MYCNOSP40205 109 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 PSMB3P49720 205 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 MEOX2P50222 304 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 PMS2P11Q13670 270 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 KLF5Q13887 457 aaPredicted RBP7.28□□□□□ -1.24
YBX3-215ENST00000544504 USF2Q15853 346 aaPredicted RBP7.28□□□□□ -1.24
YBX3-215ENST00000544504 GCSAMLQ5JQS6 135 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 IL34Q6ZMJ4 242 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 BPIFA4PQ86YQ2 179 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 C11orf44Q8N8P7 122 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 OR4F17Q8NGA8 305 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 OR4F4Q96R69 305 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 SEPSECSQ9HD40 501 aaKnown RBP7.28□□□□□ -1.24
YBX3-215ENST00000544504 TMEM167BQ9NRX6 74 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 PLA2G2EQ9NZK7 142 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 TMEM14CQ9P0S9 112 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 SACSQ9NZJ4 4579 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 A0A1W2PRX2 142 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 ZNF98A6NK75 572 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 OR7C2O60412 319 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 FHITP49789 147 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 KRTAP10-3P60369 221 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 FHL3Q13643 280 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 ZNF726P1Q15940 193 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 NDUFA5Q16718 116 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 LCN15Q6UWW0 184 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 C8orf86Q6ZUL3 223 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 MIR17HGQ75NE6 70 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 OR8I2Q8N0Y5 310 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 LYPD6BQ8NI32 183 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 MRAPQ8TCY5 172 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 UHRF2Q96PU4 802 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 OR51M1Q9H341 326 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 HRH4Q9H3N8 390 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 MED9Q9NWA0 146 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 ARL2-SNX15V9GYD0 113 aa7.27□□□□□ -1.25
YBX3-215ENST00000544504 IGHV7-4-1A0A0J9YVY3 117 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 HELTA6NFD8 242 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 BUB3O43684 328 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 PRB2P02812 416 aaPredicted RBP7.26□□□□□ -1.25
YBX3-215ENST00000544504 ARL14EPLP0DKL9 152 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 GCHFRP30047 84 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 GALR1P47211 349 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 SYNJ2BPP57105 145 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 GUK1Q16774 197 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 DEFB136Q30KP8 78 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 NSUN5P1Q3KNT7 163 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 SAMD5Q5TGI4 173 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 SAMD13Q5VXD3 122 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 UNQ9165/PRO28630Q6UXU0 137 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 IQCF2Q8IXL9 164 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 RAX2Q96IS3 184 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 TXNDC17Q9BRA2 123 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 PAXXQ9BUH6 204 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 SCRT1Q9BWW7 348 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 SMPXQ9UHP9 88 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 U3KQE9 123 aa7.26□□□□□ -1.25
YBX3-215ENST00000544504 ADARB2-AS1A8MUL3 147 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 PF4P02776 101 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 HIST1H1EP10412 219 aaKnown RBP7.25□□□□□ -1.25
YBX3-215ENST00000544504 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
YBX3-215ENST00000544504 SLURP1P55000 103 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 UBE2L3P68036 154 aaKnown RBP7.25□□□□□ -1.25
YBX3-215ENST00000544504 SPATA31B1PQ5VZV4 182 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 C18orf65Q6ZTR6 163 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 OR9G4Q8NGQ1 327 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 SUN5Q8TC36 379 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 ZNF414Q96IQ9 312 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 FAM167A-AS1Q96KT0 104 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 SLC25A2Q9BXI2 301 aa7.25□□□□□ -1.25
YBX3-215ENST00000544504 NKX6-2Q9C056 277 aaPredicted RBP7.25□□□□□ -1.25
YBX3-215ENST00000544504 IGHV3OR16-8A0A075B7F1 116 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 TMEM213A2RRL7 107 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 RAB19A4D1S5 217 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 LINC00862A6NCI5 91 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 C2orf70A6NJV1 201 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 OVOL1O14753 267 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 HMGB3O15347 200 aaKnown RBP7.24□□□□□ -1.25
YBX3-215ENST00000544504 ZNF207O43670 478 aaKnown RBP7.24□□□□□ -1.25
YBX3-215ENST00000544504 NDUFS6O75380 124 aaKnown RBP7.24□□□□□ -1.25
YBX3-215ENST00000544504 NBEAP1P0C6P0 100 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 GP9P14770 177 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 FGF8P55075 233 aaPredicted RBP7.24□□□□□ -1.25
YBX3-215ENST00000544504 PDE6HQ13956 83 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 TM4SF20Q53R12 229 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 C16orf54Q6UWD8 224 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 RHPN1-AS1Q9BWJ2 59 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 SMDT1Q9H4I9 107 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 CLEC5AQ9NY25 188 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 SIGLEC8Q9NYZ4 499 aa7.24□□□□□ -1.25
YBX3-215ENST00000544504 A0A087X0K7 114 aa7.23□□□□□ -1.25
YBX3-215ENST00000544504 TRAV5A0A0B4J249 113 aa7.23□□□□□ -1.25
YBX3-215ENST00000544504 ZNF785A8K8V0 405 aa7.23□□□□□ -1.25
YBX3-215ENST00000544504 CHEK1O14757 476 aa7.23□□□□□ -1.25
YBX3-215ENST00000544504 ZNF253O75346 499 aa7.23□□□□□ -1.25
YBX3-215ENST00000544504 FOLR2P14207 255 aa7.23□□□□□ -1.25
YBX3-215ENST00000544504 CBLN1P23435 193 aa7.23□□□□□ -1.25
YBX3-215ENST00000544504 MORN5Q5VZ52 161 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms