RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 NPIPB6E9PJ23 425 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 OR2C1O95371 312 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 ADCYAP1P18509 176 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 S100A7P31151 101 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 C10orf91Q5T1B1 145 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 MORN5Q5VZ52 161 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 ZNF600Q6ZNG1 722 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 CCDC28AQ8IWP9 274 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 SVBPQ8N300 66 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 ZNF491Q8N8L2 437 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 CYB561D1Q8N8Q1 229 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 OR4F5Q8NH21 305 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 FAM167A-AS1Q96KT0 104 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 OR4F4Q96R69 305 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 CHRDL1Q9BU40 450 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 PAXXQ9BUH6 204 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 SLC25A39Q9BZJ4 359 aaPredicted RBP7.78□□□□□ -1.16
MDH1-216ENST00000544381 OR51M1Q9H341 326 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 ZNF702PQ9H963 129 aa7.78□□□□□ -1.16
MDH1-216ENST00000544381 MRPL27Q9P0M9 148 aaKnown RBP7.78□□□□□ -1.16
MDH1-216ENST00000544381 TMEM89A2RUT3 159 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 DNAJC9-AS1A6NH13 148 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 TGOLN2O43493 480 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 PDE6DO43924 150 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 NDUFS6O75380 124 aaKnown RBP7.77□□□□□ -1.17
MDH1-216ENST00000544381 SNAPINO95295 136 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 IGHG4P01861 327 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 OR10J4P0C629 311 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 MED14OSP0DP75 135 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 RAB9AP51151 201 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 CD81P60033 236 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 UBE2L3P68036 154 aaKnown RBP7.77□□□□□ -1.17
MDH1-216ENST00000544381 CFHR3Q02985 330 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 RELQ04864 619 aaPredicted RBP7.77□□□□□ -1.17
MDH1-216ENST00000544381 ZNF329Q86UD4 541 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 ZNF503Q96F45 646 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 KLK15Q9H2R5 256 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 RNF24Q9Y225 148 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 PUS1Q9Y606 427 aaKnown RBP eCLIP7.77□□□□□ -1.17
MDH1-216ENST00000544381 ARL2-SNX15V9GYD0 113 aa7.77□□□□□ -1.17
MDH1-216ENST00000544381 NOTCH1P46531 2555 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 FAM74A7A6NL05 159 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 F6UZH7 168 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 BMPR1BO00238 502 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 TCF21O43680 179 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 ARL3P36405 182 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 ATP5G3P48201 142 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 KIAA0141Q14154 515 aaPredicted RBP7.76□□□□□ -1.17
MDH1-216ENST00000544381 GUCA2BQ16661 112 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 TEX38Q6PEX7 206 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 C1QL4Q86Z23 238 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 Q8N2B8 174 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 SUN5Q8TC36 379 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 ZNF418Q8TF45 676 aaPredicted RBP7.76□□□□□ -1.17
MDH1-216ENST00000544381 SHANK2-AS3Q9BTD1 123 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 RABAC1Q9UI14 185 aa7.76□□□□□ -1.17
MDH1-216ENST00000544381 YTHDF2Q9Y5A9 579 aaKnown RBP7.76□□□□□ -1.17
MDH1-216ENST00000544381 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.75□□□□□ -1.17
MDH1-216ENST00000544381 IGHV3-35A0A0C4DH35 117 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 A0A1W2PRE2 83 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 PPP5D1E7EU14 171 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 H3BRN7 92 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 CLDN34H7C241 214 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 IGHV3-11P01762 117 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 CRYBA1P05813 215 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 PYYP10082 97 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 USF2Q15853 346 aaPredicted RBP7.75□□□□□ -1.17
MDH1-216ENST00000544381 FAM209BQ5JX69 171 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 LEMD1Q68G75 181 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 TOMM20LQ6UXN7 152 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 C12orf54Q6X4T0 127 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 BPIFA4PQ86YQ2 179 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 OR4X2Q8NGF9 303 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 FXYD5Q96DB9 178 aa7.75□□□□□ -1.17
MDH1-216ENST00000544381 NKX6-2Q9C056 277 aaPredicted RBP7.75□□□□□ -1.17
MDH1-216ENST00000544381 ZNF98A6NK75 572 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 M0R036 132 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 ELANEP08246 267 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 NBEAP1P0C6P0 100 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 PSMB8P28062 276 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 FOXE3Q13461 319 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 ZNF674Q2M3X9 581 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 FAM74A3Q4VXF1 159 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 FAM90A2PQ658T7 463 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 ZNF343Q6P1L6 599 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 LCNL1Q6ZST4 164 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 BLNKQ8WV28 456 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 RPUSD4Q96CM3 377 aaKnown RBP7.74□□□□□ -1.17
MDH1-216ENST00000544381 NIPSNAP3BQ9BS92 247 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 TMEM14CQ9P0S9 112 aa7.74□□□□□ -1.17
MDH1-216ENST00000544381 H3BQ15 152 aa7.73□□□□□ -1.17
MDH1-216ENST00000544381 SCO1O75880 301 aa7.73□□□□□ -1.17
MDH1-216ENST00000544381 HIST1H1EP10412 219 aaKnown RBP7.73□□□□□ -1.17
MDH1-216ENST00000544381 GP9P14770 177 aa7.73□□□□□ -1.17
MDH1-216ENST00000544381 RPL15P61313 204 aaKnown RBP7.73□□□□□ -1.17
MDH1-216ENST00000544381 SUMO1P63165 101 aaKnown RBP7.73□□□□□ -1.17
MDH1-216ENST00000544381 CLRN3Q8NCR9 226 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms