RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 H7BYZ3 331 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 CLDN34H7C241 214 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 M0R3E3 92 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 GNG4P50150 75 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 C19orf54Q5BKX5 351 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 PRR31Q5SQ13 230 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 H3BRN7 92 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 IGHG2P01859 326 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 FRMD6-AS1P0C7T7 363 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 HLA-DMBP28068 263 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 PRR27Q6MZM9 219 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 SMR3AQ99954 134 aa10.59□□□□□ -0.71
HCFC2-202ENST00000544223 SPINK4O60575 86 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 GALR1P47211 349 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 YPEL3P61236 119 aaPredicted RBP10.58□□□□□ -0.72
HCFC2-202ENST00000544223 LRRC75A-AS1Q8N1F1 130 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 TUBA4BQ9H853 241 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 B4DEV8 164 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 PEX7O00628 323 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 EDN2P20800 178 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 PPIFP30405 207 aaKnown RBP10.58□□□□□ -0.72
HCFC2-202ENST00000544223 MYCNOSP40205 109 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 SLC35B1P78383 322 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
HCFC2-202ENST00000544223 SAV1Q9H4B6 383 aaPredicted RBP10.58□□□□□ -0.72
HCFC2-202ENST00000544223 CYB5R2Q6BCY4 276 aa10.57□□□□□ -0.72
HCFC2-202ENST00000544223 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
HCFC2-202ENST00000544223 TRGC2P03986 189 aa10.57□□□□□ -0.72
HCFC2-202ENST00000544223 TEX38Q6PEX7 206 aa10.57□□□□□ -0.72
HCFC2-202ENST00000544223 IGF2BP2-AS1Q96M15 143 aa10.57□□□□□ -0.72
HCFC2-202ENST00000544223 EPDR1Q9UM22 224 aa10.57□□□□□ -0.72
HCFC2-202ENST00000544223 SMAD5-AS1Q9Y6J3 95 aa10.57□□□□□ -0.72
HCFC2-202ENST00000544223 HIVEP1P15822 2718 aa10.57□□□□□ -0.72
HCFC2-202ENST00000544223 WNK1Q9H4A3 2382 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 TRAV30A0A087WSZ9 112 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 CLPSL1A2RUU4 121 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 MRPS12O15235 138 aaKnown RBP10.56□□□□□ -0.72
HCFC2-202ENST00000544223 IGF1P05019 195 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 IGLC2P0DOY2 106 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 TCL1AP56279 114 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 ERVFC1-1P60608 527 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 FAM210BQ96KR6 192 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 J3QLI3 93 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 TGOLN2O43493 480 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 FSHBP01225 129 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 PFN1P07737 140 aaKnown RBP10.56□□□□□ -0.72
HCFC2-202ENST00000544223 HIST1H1BP16401 226 aaKnown RBP10.56□□□□□ -0.72
HCFC2-202ENST00000544223 GOLT1AQ6ZVE7 132 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 BPIFA4PQ86YQ2 179 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 OR8I2Q8N0Y5 310 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 VN1R17PQ8TDU5 208 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 EEF1AKMT3Q96AZ1 226 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 TXNDC17Q9BRA2 123 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 PITPNC1Q9UKF7 332 aa10.56□□□□□ -0.72
HCFC2-202ENST00000544223 TRBV19A0A075B6N1 114 aa10.55□□□□□ -0.72
HCFC2-202ENST00000544223 ZNF705FA8MVS1 300 aaPredicted RBP10.55□□□□□ -0.72
HCFC2-202ENST00000544223 SIGLECL1Q8N7X8 197 aa10.55□□□□□ -0.72
HCFC2-202ENST00000544223 FABP1P07148 127 aa10.55□□□□□ -0.72
HCFC2-202ENST00000544223 HIST1H1EP10412 219 aaKnown RBP10.55□□□□□ -0.72
HCFC2-202ENST00000544223 LINC00322Q6ZN03 302 aaPredicted RBP10.55□□□□□ -0.72
HCFC2-202ENST00000544223 RNF182Q8N6D2 247 aa10.55□□□□□ -0.72
HCFC2-202ENST00000544223 MBD6Q96DN6 1003 aa10.55□□□□□ -0.72
HCFC2-202ENST00000544223 SERTAD4Q9NUC0 356 aa10.55□□□□□ -0.72
HCFC2-202ENST00000544223 RABAC1Q9UI14 185 aa10.55□□□□□ -0.72
HCFC2-202ENST00000544223 SORL1Q92673 2214 aa10.55□□□□□ -0.72
HCFC2-202ENST00000544223 IGKV3-7A0A075B6H7 116 aa10.54□□□□□ -0.72
HCFC2-202ENST00000544223 SNRPEP62304 92 aaKnown RBP10.54□□□□□ -0.72
HCFC2-202ENST00000544223 Q6YL49 198 aa10.54□□□□□ -0.72
HCFC2-202ENST00000544223 STXBP6Q8NFX7 210 aa10.54□□□□□ -0.72
HCFC2-202ENST00000544223 ARL3P36405 182 aa10.54□□□□□ -0.72
HCFC2-202ENST00000544223 SIGLEC15Q6ZMC9 328 aa10.54□□□□□ -0.72
HCFC2-202ENST00000544223 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
HCFC2-202ENST00000544223 OR4F17Q8NGA8 305 aa10.54□□□□□ -0.72
HCFC2-202ENST00000544223 OR10G8Q8NGN5 311 aa10.54□□□□□ -0.72
HCFC2-202ENST00000544223 ZNF320A2RRD8 509 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 C1orf196B1AJZ1 125 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 AP4M1O00189 453 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 TCRAP04437 139 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 RAB9AP51151 201 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 CNN1P51911 297 aaKnown RBP10.53□□□□□ -0.72
HCFC2-202ENST00000544223 OR4X2Q8NGF9 303 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 TMEM68Q96MH6 324 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 TMEM242Q9NWH2 141 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 VPREB3Q9UKI3 123 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 CXorf65A6NEN9 183 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 PRNTQ86SH4 94 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 HIVEP2P31629 2446 aa10.53□□□□□ -0.72
HCFC2-202ENST00000544223 C9JCJ5 164 aa10.52□□□□□ -0.72
HCFC2-202ENST00000544223 RPLP1P05386 114 aaKnown RBP10.52□□□□□ -0.72
HCFC2-202ENST00000544223 UBE2G1P62253 170 aa10.52□□□□□ -0.72
HCFC2-202ENST00000544223 CTDSP1Q9GZU7 261 aa10.52□□□□□ -0.72
HCFC2-202ENST00000544223 TMEM14CQ9P0S9 112 aa10.52□□□□□ -0.72
HCFC2-202ENST00000544223 TRBV7-1A0A0A6YYK4 115 aa10.52□□□□□ -0.73
HCFC2-202ENST00000544223 BMPR1BO00238 502 aa10.52□□□□□ -0.73
HCFC2-202ENST00000544223 KRTAP1-1Q07627 177 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms