RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 LGALS9BQ3B8N2 356 aa13.93□□□□□ -0.18
CACNA1C-230ENST00000543114 SPANXN5Q5MJ07 72 aa13.93□□□□□ -0.18
CACNA1C-230ENST00000543114 BPIFCQ8NFQ6 507 aa13.93□□□□□ -0.18
CACNA1C-230ENST00000543114 OXA1LQ15070 435 aa13.92□□□□□ -0.18
CACNA1C-230ENST00000543114 OR1B1Q8NGR6 318 aa13.92□□□□□ -0.18
CACNA1C-230ENST00000543114 IGF2BP2-AS1Q96M15 143 aa13.92□□□□□ -0.18
CACNA1C-230ENST00000543114 TMEM147Q9BVK8 224 aa13.92□□□□□ -0.18
CACNA1C-230ENST00000543114 IFNA21P01568 189 aa13.91□□□□□ -0.18
CACNA1C-230ENST00000543114 CNN1P51911 297 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-230ENST00000543114 IGFL4Q6B9Z1 124 aa13.91□□□□□ -0.18
CACNA1C-230ENST00000543114 TMEM88Q6PEY1 159 aa13.91□□□□□ -0.18
CACNA1C-230ENST00000543114 OR4D5Q8NGN0 318 aa13.91□□□□□ -0.18
CACNA1C-230ENST00000543114 TRAV8-2A0A0B4J237 113 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 H3BRN7 92 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 M0R2Z0 102 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 DAD1P61803 113 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 SPINK13Q1W4C9 94 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 Q6ZR54 194 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 RNF182Q8N6D2 247 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 OR11H7Q8NGC8 314 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 DEDD2Q8WXF8 326 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 GPR82Q96P67 336 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 TMEM208Q9BTX3 173 aa13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 STRAPQ9Y3F4 350 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-230ENST00000543114 CRXO43186 299 aaPredicted RBP13.89□□□□□ -0.19
CACNA1C-230ENST00000543114 ADAP1O75689 374 aa13.89□□□□□ -0.19
CACNA1C-230ENST00000543114 PRM2P04554 102 aa13.89□□□□□ -0.19
CACNA1C-230ENST00000543114 POLR2GP62487 172 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNA1C-230ENST00000543114 CCDC190Q86UF4 302 aa13.89□□□□□ -0.19
CACNA1C-230ENST00000543114 ABCA13Q86UQ4 5058 aa13.88□□□□□ -0.19
CACNA1C-230ENST00000543114 SMCO3A2RU48 225 aa13.88□□□□□ -0.19
CACNA1C-230ENST00000543114 INSP01308 110 aa13.88□□□□□ -0.19
CACNA1C-230ENST00000543114 CYP2G1PQ6ZSU1 146 aa13.88□□□□□ -0.19
CACNA1C-230ENST00000543114 TMEM144Q7Z5S9 345 aa13.88□□□□□ -0.19
CACNA1C-230ENST00000543114 BAP18Q8IXM2 172 aa13.88□□□□□ -0.19
CACNA1C-230ENST00000543114 SLC25A39Q9BZJ4 359 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-230ENST00000543114 ZNF705GA8MUZ8 300 aaPredicted RBP13.87□□□□□ -0.19
CACNA1C-230ENST00000543114 FGL1Q08830 312 aa13.87□□□□□ -0.19
CACNA1C-230ENST00000543114 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
CACNA1C-230ENST00000543114 MUC4Q99102 2169 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 C9orf170A2RU37 121 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 PMS2P5A8MQ11 134 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 CCNKO75909 580 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 DUSP14O95147 198 aaKnown RBP13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 IL5P05113 134 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 MED14OSP0DP75 135 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 S100A5P33763 92 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 UBE2MP61081 183 aaKnown RBP13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 ID3Q02535 119 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 RNF212Q495C1 297 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 ZNF738Q8NE65 137 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 UHRF2Q96PU4 802 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 HIGD1AQ9Y241 93 aa13.86□□□□□ -0.19
CACNA1C-230ENST00000543114 TRAV12-2A0A075B6T6 113 aa13.85□□□□□ -0.19
CACNA1C-230ENST00000543114 SSSCA1O60232 199 aa13.85□□□□□ -0.19
CACNA1C-230ENST00000543114 LINC00869P0C866 280 aa13.85□□□□□ -0.19
CACNA1C-230ENST00000543114 S100A7P31151 101 aa13.85□□□□□ -0.19
CACNA1C-230ENST00000543114 RAP2BP61225 183 aa13.85□□□□□ -0.19
CACNA1C-230ENST00000543114 SRRQ9GZT4 340 aa13.85□□□□□ -0.19
CACNA1C-230ENST00000543114 PSENENQ9NZ42 101 aa13.85□□□□□ -0.19
CACNA1C-230ENST00000543114 PLAC8L1A1L4L8 177 aa13.84□□□□□ -0.19
CACNA1C-230ENST00000543114 CCDC160A6NGH7 325 aa13.84□□□□□ -0.19
CACNA1C-230ENST00000543114 BOLA2-SMG1P6H3BVE0 249 aa13.84□□□□□ -0.19
CACNA1C-230ENST00000543114 RPL7P18124 248 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-230ENST00000543114 FLVCR2Q9UPI3 526 aa13.84□□□□□ -0.19
CACNA1C-230ENST00000543114 HSPG2P98160 4391 aa13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 LYRM9A8MSI8 78 aa13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 HYPMO75409 117 aa13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 NDUFB6O95139 128 aa13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 OR5G3P0C626 314 aa13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 PRB4P10163 310 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 CXCL3P19876 107 aa13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 PLP1P60201 277 aa13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 RRAS2P62070 204 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 C15orf53Q8NAA6 179 aa13.83□□□□□ -0.2
CACNA1C-230ENST00000543114 A0A087X0K7 114 aa13.82□□□□□ -0.2
CACNA1C-230ENST00000543114 METTL15P1P0C7V9 234 aa13.82□□□□□ -0.2
CACNA1C-230ENST00000543114 AZU1P20160 251 aa13.82□□□□□ -0.2
CACNA1C-230ENST00000543114 TSPOP30536 169 aa13.82□□□□□ -0.2
CACNA1C-230ENST00000543114 DLK1P80370 383 aa13.82□□□□□ -0.2
CACNA1C-230ENST00000543114 HIST1H1AQ02539 215 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-230ENST00000543114 TMEM14EPQ6UXP3 125 aa13.82□□□□□ -0.2
CACNA1C-230ENST00000543114 RBM38Q9H0Z9 239 aaKnown RBP13.82□□□□□ -0.2
CACNA1C-230ENST00000543114 OR4E1P0C645 316 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 DEFB130BP0DP73 79 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 DEFB130AP0DP74 79 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 SELENOTP62341 195 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 SLC38A11Q08AI6 406 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 BAK1Q16611 211 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 SPANXN2Q5MJ10 180 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 OR8A1Q8NGG7 326 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 SMIM8Q96KF7 97 aa13.81□□□□□ -0.2
CACNA1C-230ENST00000543114 MRPS12O15235 138 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-230ENST00000543114 B2MP61769 119 aa13.8□□□□□ -0.2
CACNA1C-230ENST00000543114 RHOBP62745 196 aa13.8□□□□□ -0.2
CACNA1C-230ENST00000543114 FCN2Q15485 313 aa13.8□□□□□ -0.2
CACNA1C-230ENST00000543114 SOHLH1Q5JUK2 328 aa13.8□□□□□ -0.2
CACNA1C-230ENST00000543114 PATE2Q6UY27 113 aa13.8□□□□□ -0.2
CACNA1C-230ENST00000543114 ZNF575Q86XF7 245 aa13.8□□□□□ -0.2
CACNA1C-230ENST00000543114 ARL6Q9H0F7 186 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms