RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 TMUB2Q71RG4 321 aa9.16□□□□□ -0.94
DDX55-210ENST00000543016 GTSCR1Q86UQ5 136 aa9.16□□□□□ -0.94
DDX55-210ENST00000543016 FAM110AQ9BQ89 295 aa9.16□□□□□ -0.94
DDX55-210ENST00000543016 RSG1Q9BU20 258 aa9.16□□□□□ -0.94
DDX55-210ENST00000543016 MRPL32Q9BYC8 188 aaKnown RBP9.16□□□□□ -0.94
DDX55-210ENST00000543016 CYTL1Q9NRR1 136 aa9.16□□□□□ -0.94
DDX55-210ENST00000543016 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 DNASE2O00115 360 aaPredicted RBP9.15□□□□□ -0.94
DDX55-210ENST00000543016 ATP6V0CP27449 155 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 KRTAP10-11P60412 298 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 FFAR4Q5NUL3 377 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 BPIFA4PQ86YQ2 179 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 HSD17B11Q8NBQ5 300 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 STXBP6Q8NFX7 210 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 NRN1Q9NPD7 142 aa9.15□□□□□ -0.94
DDX55-210ENST00000543016 NBEAL1Q6ZS30 2694 aa9.14□□□□□ -0.95
DDX55-210ENST00000543016 M6PRP20645 277 aa9.14□□□□□ -0.95
DDX55-210ENST00000543016 RHOBP62745 196 aa9.14□□□□□ -0.95
DDX55-210ENST00000543016 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
DDX55-210ENST00000543016 EIF5AL1Q6IS14 154 aaKnown RBP9.14□□□□□ -0.95
DDX55-210ENST00000543016 UHRF2Q96PU4 802 aa9.14□□□□□ -0.95
DDX55-210ENST00000543016 SCRT1Q9BWW7 348 aa9.14□□□□□ -0.95
DDX55-210ENST00000543016 ZNF471Q9BX82 626 aaPredicted RBP9.14□□□□□ -0.95
DDX55-210ENST00000543016 MS4A6AQ9H2W1 248 aa9.14□□□□□ -0.95
DDX55-210ENST00000543016 SLC25A22Q9H936 323 aa9.14□□□□□ -0.95
DDX55-210ENST00000543016 SEC11BP0C7V7 166 aa9.13□□□□□ -0.95
DDX55-210ENST00000543016 TPT1P13693 172 aaKnown RBP9.13□□□□□ -0.95
DDX55-210ENST00000543016 TAS2R45P59539 299 aa9.13□□□□□ -0.95
DDX55-210ENST00000543016 FAM78BQ5VT40 261 aa9.13□□□□□ -0.95
DDX55-210ENST00000543016 STOML3Q8TAV4 291 aa9.13□□□□□ -0.95
DDX55-210ENST00000543016 SLC25A32Q9H2D1 315 aa9.13□□□□□ -0.95
DDX55-210ENST00000543016 TMEM14CQ9P0S9 112 aa9.13□□□□□ -0.95
DDX55-210ENST00000543016 FUT9Q9Y231 359 aa9.13□□□□□ -0.95
DDX55-210ENST00000543016 A0A087X0K7 114 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 A0A1W2PPV4 95 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 K7EQG2 157 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 SPP1P10451 314 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 ATF4P18848 351 aaPredicted RBP9.12□□□□□ -0.95
DDX55-210ENST00000543016 ID1P41134 155 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
DDX55-210ENST00000543016 CD300CQ08708 224 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 GUK1Q16774 197 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 SLC51BQ86UW2 128 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 BAP18Q8IXM2 172 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 C9orf62Q8N4C0 152 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 OR10G4Q8NGN3 311 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 OR10G9Q8NGN4 311 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 OR10G7Q8NGN6 311 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 DCANP1Q8TF63 244 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 CLEC5AQ9NY25 188 aa9.12□□□□□ -0.95
DDX55-210ENST00000543016 UMAD1C9J7I0 102 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 ISLRO14498 428 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 CD81P60033 236 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 TMEM41BQ5BJD5 291 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 GCSAMLQ5JQS6 135 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 AKR1C8PQ5T2L2 129 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 LEMD1Q68G75 181 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 GBGT1Q8N5D6 347 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 PRR25Q96S07 402 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 HRH4Q9H3N8 390 aa9.11□□□□□ -0.95
DDX55-210ENST00000543016 AURKAIP1Q9NWT8 199 aaPredicted RBP9.11□□□□□ -0.95
DDX55-210ENST00000543016 IGKV3-7A0A075B6H7 116 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 A8MZ25 164 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 OR11H12B2RN74 326 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 MRPS12O15235 138 aaKnown RBP9.1□□□□□ -0.95
DDX55-210ENST00000543016 ZNF253O75346 499 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 HIST1H1EP10412 219 aaKnown RBP9.1□□□□□ -0.95
DDX55-210ENST00000543016 PSMB3P49720 205 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 PDE6HQ13956 83 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 KHDC3LQ587J8 217 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 LCN15Q6UWW0 184 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 Q8N1Y9 231 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 ACTR3CQ9C0K3 210 aaPredicted RBP9.1□□□□□ -0.95
DDX55-210ENST00000543016 SH3BGRL3Q9H299 93 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 SMAD5-AS1Q9Y6J3 95 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 CMYA5Q8N3K9 4069 aa9.1□□□□□ -0.95
DDX55-210ENST00000543016 J3QL48 77 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 IGLC2P0DOY2 106 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 TFPI2P48307 235 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 CDC34P49427 236 aaPredicted RBP9.09□□□□□ -0.95
DDX55-210ENST00000543016 RAB5CP51148 216 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 RAB2AP61019 212 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 DPPA3Q6W0C5 159 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 MIR17HGQ75NE6 70 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 WFDC3Q8IUB2 231 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 FAM167A-AS1Q96KT0 104 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 C16orf92Q96LL3 132 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 SLC50A1Q9BRV3 221 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 SLC25A2Q9BXI2 301 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 OR51M1Q9H341 326 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 RPRMQ9NS64 109 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 SELENOKQ9Y6D0 94 aa9.09□□□□□ -0.95
DDX55-210ENST00000543016 TRAV5A0A0B4J249 113 aa9.08□□□□□ -0.96
DDX55-210ENST00000543016 SOCS3O14543 225 aa9.08□□□□□ -0.96
DDX55-210ENST00000543016 CD7P09564 240 aa9.08□□□□□ -0.96
DDX55-210ENST00000543016 DEFA6Q01524 100 aa9.08□□□□□ -0.96
DDX55-210ENST00000543016 MORN5Q5VZ52 161 aa9.08□□□□□ -0.96
DDX55-210ENST00000543016 FAM122CQ6P4D5 195 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms