RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 INSP01308 110 aa12.34□□□□□ -0.43
PPP1CA-210ENST00000542876 B2MP61769 119 aa12.34□□□□□ -0.43
PPP1CA-210ENST00000542876 C1orf134Q5TEV5 83 aa12.34□□□□□ -0.43
PPP1CA-210ENST00000542876 TOMM5Q8N4H5 51 aa12.34□□□□□ -0.43
PPP1CA-210ENST00000542876 LRTM2Q8N967 370 aa12.34□□□□□ -0.43
PPP1CA-210ENST00000542876 ATG101Q9BSB4 218 aa12.34□□□□□ -0.43
PPP1CA-210ENST00000542876 DNAH11Q96DT5 4516 aa12.34□□□□□ -0.43
PPP1CA-210ENST00000542876 A8MTW9 85 aa12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 FAM3BP58499 235 aaPredicted RBP12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 FGL1Q08830 312 aa12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 SPANXN5Q5MJ07 72 aa12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 AMTNQ6UX39 209 aa12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 MCFD2Q8NI22 146 aa12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 SOSTQ9BQB4 213 aa12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 SLC25A21Q9BQT8 299 aaPredicted RBP12.33□□□□□ -0.44
PPP1CA-210ENST00000542876 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
PPP1CA-210ENST00000542876 GATA2P23769 480 aaPredicted RBP12.32□□□□□ -0.44
PPP1CA-210ENST00000542876 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
PPP1CA-210ENST00000542876 CNPY1Q3B7I2 92 aa12.32□□□□□ -0.44
PPP1CA-210ENST00000542876 PYDC2Q56P42 97 aa12.32□□□□□ -0.44
PPP1CA-210ENST00000542876 OR11H7Q8NGC8 314 aa12.32□□□□□ -0.44
PPP1CA-210ENST00000542876 STRAPQ9Y3F4 350 aaKnown RBP12.32□□□□□ -0.44
PPP1CA-210ENST00000542876 SMCO3A2RU48 225 aa12.31□□□□□ -0.44
PPP1CA-210ENST00000542876 ZNF705GA8MUZ8 300 aaPredicted RBP12.31□□□□□ -0.44
PPP1CA-210ENST00000542876 M0R2Z0 102 aa12.31□□□□□ -0.44
PPP1CA-210ENST00000542876 SFT2D2O95562 160 aa12.31□□□□□ -0.44
PPP1CA-210ENST00000542876 HOXB5P09067 269 aa12.31□□□□□ -0.44
PPP1CA-210ENST00000542876 RAP2BP61225 183 aa12.31□□□□□ -0.44
PPP1CA-210ENST00000542876 ZNF738Q8NE65 137 aa12.31□□□□□ -0.44
PPP1CA-210ENST00000542876 PPP1R14DQ9NXH3 145 aa12.31□□□□□ -0.44
PPP1CA-210ENST00000542876 DYNC1H1Q14204 4646 aaKnown RBP12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 PRSS46E5RG02 174 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 H3BP45 60 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 IL5P05113 134 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 DEFB130BP0DP73 79 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 DEFB130AP0DP74 79 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 RPL7P18124 248 aaKnown RBP12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 IGFL4Q6B9Z1 124 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 TMEM182Q6ZP80 229 aaPredicted RBP12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 ACOT7LQ6ZUV0 252 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 RNF182Q8N6D2 247 aa12.3□□□□□ -0.44
PPP1CA-210ENST00000542876 TSPOP30536 169 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 RHOBP62745 196 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 PPP1R1AQ13522 171 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 TMEM144Q7Z5S9 345 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 LRRC20Q8TCA0 184 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 DEDD2Q8WXF8 326 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 TRIM63Q969Q1 353 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 C17orf77Q96MU5 243 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 SLC25A39Q9BZJ4 359 aaPredicted RBP12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 HIGD1AQ9Y241 93 aa12.29□□□□□ -0.44
PPP1CA-210ENST00000542876 PKD1P98161 4303 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 TRAV8-2A0A0B4J237 113 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 F5H768 121 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 BOLA2-SMG1P6H3BVE0 249 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 CRXO43186 299 aaPredicted RBP12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 CYP2G1PQ6ZSU1 146 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 CCDC190Q86UF4 302 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 ZNF575Q86XF7 245 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 BAP18Q8IXM2 172 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
PPP1CA-210ENST00000542876 RYR1P21817 5038 aa12.27□□□□□ -0.44
PPP1CA-210ENST00000542876 H3BRN7 92 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 HYPMO75409 117 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 NUDT3O95989 172 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 PRM2P04554 102 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 ATP5G1P05496 136 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 OR5G3P0C626 314 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 ATP5G3P48201 142 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 HIST1H1AQ02539 215 aaPredicted RBP12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 TMEM256Q8N2U0 113 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 LINC01587Q99440 93 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 RNF24Q9Y225 148 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 V9GYH0 126 aa12.27□□□□□ -0.45
PPP1CA-210ENST00000542876 TRAV12-2A0A075B6T6 113 aa12.26□□□□□ -0.45
PPP1CA-210ENST00000542876 LINC00869P0C866 280 aa12.26□□□□□ -0.45
PPP1CA-210ENST00000542876 HTN1P15515 57 aa12.26□□□□□ -0.45
PPP1CA-210ENST00000542876 S100A5P33763 92 aa12.26□□□□□ -0.45
PPP1CA-210ENST00000542876 CCL18P55774 89 aa12.26□□□□□ -0.45
PPP1CA-210ENST00000542876 SELENOTP62341 195 aa12.26□□□□□ -0.45
PPP1CA-210ENST00000542876 PSENENQ9NZ42 101 aa12.26□□□□□ -0.45
PPP1CA-210ENST00000542876 TAS2R60P59551 318 aa12.25□□□□□ -0.45
PPP1CA-210ENST00000542876 UBE2MP61081 183 aaKnown RBP12.25□□□□□ -0.45
PPP1CA-210ENST00000542876 POLR2GP62487 172 aaKnown RBP eCLIP12.25□□□□□ -0.45
PPP1CA-210ENST00000542876 OR8A1Q8NGG7 326 aa12.25□□□□□ -0.45
PPP1CA-210ENST00000542876 PTTG2Q9NZH5 202 aa12.25□□□□□ -0.45
PPP1CA-210ENST00000542876 NBDYA0A0U1RRE5 68 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 CBY3A6NI87 242 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 CXCL3P19876 107 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 ANXA7P20073 488 aaKnown RBP12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 AZU1P20160 251 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 ID3Q02535 119 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 FCN2Q15485 313 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 PSG3Q16557 428 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 C16orf74Q96GX8 76 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 UHRF2Q96PU4 802 aa12.24□□□□□ -0.45
PPP1CA-210ENST00000542876 MUC4Q99102 2169 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms