RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, human

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB6A-208	ENST00000541795	HIST1H1E	P10412	219 aa	Known RBP	13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	ZNF674	Q2M3X9	581 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	ATRAID	Q6UW56	229 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	OR4F17	Q8NGA8	305 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	JMJD8	Q96S16	334 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	METTL26	Q96S19	204 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	NIPSNAP3B	Q9BS92	247 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	C20orf24	Q9BUV8	137 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	PARL	Q9H300	379 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	HIVEP1	P15822	2718 aa		13.6	□□□□□ -0.23
RAB6A-208	ENST00000541795	GGCT	O75223	188 aa	Known RBP	13.59	□□□□□ -0.23
RAB6A-208	ENST00000541795	NPPC	P23582	126 aa		13.59	□□□□□ -0.23
RAB6A-208	ENST00000541795	NKX6-2	Q9C056	277 aa	Predicted RBP	13.59	□□□□□ -0.23
RAB6A-208	ENST00000541795	BAHCC1	Q9P281	2608 aa		13.58	□□□□□ -0.23
RAB6A-208	ENST00000541795	ZNF727	A8MUV8	499 aa		13.58	□□□□□ -0.24
RAB6A-208	ENST00000541795		H3BQ15	152 aa		13.58	□□□□□ -0.24
RAB6A-208	ENST00000541795	MRPS12	O15235	138 aa	Known RBP	13.58	□□□□□ -0.24
RAB6A-208	ENST00000541795	SUMO1	P63165	101 aa	Known RBP	13.58	□□□□□ -0.24
RAB6A-208	ENST00000541795	CLRN3	Q8NCR9	226 aa		13.58	□□□□□ -0.24
RAB6A-208	ENST00000541795	UBE2E2	Q96LR5	201 aa		13.58	□□□□□ -0.24
RAB6A-208	ENST00000541795	SMIM7	Q9BQ49	75 aa		13.58	□□□□□ -0.24
RAB6A-208	ENST00000541795	ZNF586	Q9NXT0	402 aa		13.58	□□□□□ -0.24
RAB6A-208	ENST00000541795		H3BTX0	84 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	ZNF207	O43670	478 aa	Known RBP	13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	NDUFB4	O95168	129 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	IGLC2	P0DOY2	106 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	RAN	P62826	216 aa	Known RBP	13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795		M0R036	132 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	LGALS1	P09382	135 aa	Known RBP	13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	RPL7	P18124	248 aa	Known RBP	13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	FAM74A3	Q4VXF1	159 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	UNQ9165/PRO28630	Q6UXU0	137 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	OR8I2	Q8N0Y5	310 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	C11orf52	Q96A22	123 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	ELOVL1	Q9BW60	279 aa		13.57	□□□□□ -0.24
RAB6A-208	ENST00000541795	BUB3	O43684	328 aa		13.56	□□□□□ -0.24
RAB6A-208	ENST00000541795	CRYBB3	P26998	211 aa		13.56	□□□□□ -0.24
RAB6A-208	ENST00000541795	AWAT1	Q58HT5	328 aa		13.56	□□□□□ -0.24
RAB6A-208	ENST00000541795	C16orf95	Q9H693	158 aa		13.56	□□□□□ -0.24
RAB6A-208	ENST00000541795	MYCNOS	P40205	109 aa		13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795	TMEM190	Q8WZ59	177 aa		13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795	TVP23C	Q96ET8	276 aa		13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795	DERL1	Q9BUN8	251 aa		13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795		Q9H3A6	140 aa		13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795	TRBV19	A0A075B6N1	114 aa		13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795	APOH	P02749	345 aa	Predicted RBP	13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795		U3KQE9	123 aa		13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795	NF1	P21359	2839 aa		13.55	□□□□□ -0.24
RAB6A-208	ENST00000541795	IGHV3-49	A0A0A0MS15	119 aa		13.54	□□□□□ -0.24
RAB6A-208	ENST00000541795	IGHV3-66	A0A0C4DH42	116 aa		13.54	□□□□□ -0.24
RAB6A-208	ENST00000541795	ZNF320	A2RRD8	509 aa		13.54	□□□□□ -0.24
RAB6A-208	ENST00000541795	PGP	A6NDG6	321 aa		13.54	□□□□□ -0.24
RAB6A-208	ENST00000541795	C1orf194	Q5T5A4	169 aa		13.54	□□□□□ -0.24
RAB6A-208	ENST00000541795	NSD1	Q96L73	2696 aa	Predicted RBP	13.54	□□□□□ -0.24
RAB6A-208	ENST00000541795	C17orf77	Q96MU5	243 aa		13.54	□□□□□ -0.24
RAB6A-208	ENST00000541795	NAT8	Q9UHE5	227 aa		13.54	□□□□□ -0.24
RAB6A-208	ENST00000541795	IGHV3OR16-13	A0A075B7E8	117 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	IGHV3-74	A0A0B4J1X5	117 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	TMEM241	Q24JQ0	296 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	RPEL1	Q2QD12	228 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	FAM106A	Q4KMX7	169 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	TCTEX1D4	Q5JR98	221 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	GPR82	Q96P67	336 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	TCEAL7	Q9BRU2	100 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	SDF2L1	Q9HCN8	221 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	OTOR	Q9NRC9	128 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	TCF21	O43680	179 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	SLC25A5	P05141	298 aa	Known RBP	13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	ATF4	P18848	351 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	PNRC1	Q12796	327 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	PDE6H	Q13956	83 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	KHDC1L	Q5JSQ8	128 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	GPHB5	Q86YW7	130 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	LINC01006	Q8NI28	216 aa		13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	WIPF2	Q8TF74	440 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB6A-208	ENST00000541795	SLC17A3	O00476	420 aa		13.52	□□□□□ -0.25
RAB6A-208	ENST00000541795	CRLF1	O75462	422 aa		13.52	□□□□□ -0.25
RAB6A-208	ENST00000541795	CDX1	P47902	265 aa	Predicted RBP	13.52	□□□□□ -0.25
RAB6A-208	ENST00000541795	RHEB	Q15382	184 aa		13.52	□□□□□ -0.25
RAB6A-208	ENST00000541795	C2CD4C	Q8TF44	421 aa		13.52	□□□□□ -0.25
RAB6A-208	ENST00000541795	SMAD5-AS1	Q9Y6J3	95 aa		13.52	□□□□□ -0.25
RAB6A-208	ENST00000541795	IGHV4OR15-8	A0A075B7B6	117 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795		A0A087WW49	117 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	C7orf77	A4D0Y5	90 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	PEX7	O00628	323 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	NDUFA7	O95182	113 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	RPL35	P42766	123 aa	Known RBP	13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	GALR1	P47211	349 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	SIGLEC15	Q6ZMC9	328 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	C18orf65	Q6ZTR6	163 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	LYPD1	Q8N2G4	141 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	EXOC3-AS1	Q8N2X6	119 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	C5orf17	Q8NAS9	161 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	RPS10P5	Q9NQ39	176 aa		13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	DAZ1	Q9NQZ3	744 aa	Known RBP	13.51	□□□□□ -0.25
RAB6A-208	ENST00000541795	AKR1C3	P42330	323 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	GNG5	P63218	68 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	BTN1A1	Q13410	526 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	C4orf3	Q8WVX3	66 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	HIST1H2BA	Q96A08	127 aa		13.5	□□□□□ -0.25

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