RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 ZNF600Q6ZNG1 722 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 ZNF329Q86UD4 541 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 FAM223AQ8IWN6 122 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 STXBP6Q8NFX7 210 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 ISOC2Q96AB3 205 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 SHANK2-AS3Q9BTD1 123 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 SMCO4Q9NRQ5 59 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 AURKAIP1Q9NWT8 199 aaPredicted RBP7.41□□□□□ -1.22
PAAF1-209ENST00000540659 RABAC1Q9UI14 185 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 KLK9Q9UKQ9 250 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 ARL2-SNX15V9GYD0 113 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 JMJD1CQ15652 2540 aa7.41□□□□□ -1.22
PAAF1-209ENST00000540659 PGPA6NDG6 321 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 ZNF98A6NK75 572 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 NDUFS6O75380 124 aaKnown RBP7.4□□□□□ -1.22
PAAF1-209ENST00000540659 OR2C1O95371 312 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 SLC25A5P05141 298 aaKnown RBP7.4□□□□□ -1.22
PAAF1-209ENST00000540659 NBEAP1P0C6P0 100 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 ARL3P36405 182 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 GNG5P63218 68 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 TOMM20LQ6UXN7 152 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 TMEM190Q8WZ59 177 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 USMG5Q96IX5 58 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 ELOVL1Q9BW60 279 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 KLK15Q9H2R5 256 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 ZNF586Q9NXT0 402 aa7.4□□□□□ -1.22
PAAF1-209ENST00000540659 IGHV3-66A0A0C4DH42 116 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 B4DEV8 164 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 CLDN34H7C241 214 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 BMPR1BO00238 502 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 ZNF207O43670 478 aaKnown RBP7.39□□□□□ -1.23
PAAF1-209ENST00000540659 SRD5A1P18405 259 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 RPL35P42766 123 aaKnown RBP7.39□□□□□ -1.23
PAAF1-209ENST00000540659 RNF212Q495C1 297 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 C10orf99Q6UWK7 81 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 BPIFA4PQ86YQ2 179 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 OR4F17Q8NGA8 305 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 C11orf52Q96A22 123 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 ZNF414Q96IQ9 312 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 C17orf77Q96MU5 243 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 Q9H3A6 140 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 ZFAND3Q9H8U3 227 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 TMEM14CQ9P0S9 112 aa7.39□□□□□ -1.23
PAAF1-209ENST00000540659 HELTA6NFD8 242 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 PEX7O00628 323 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 IGLV1-40P01703 118 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 TRBV12-3P01733 135 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 PRB4P10163 310 aaPredicted RBP7.38□□□□□ -1.23
PAAF1-209ENST00000540659 HIST1H1EP10412 219 aaKnown RBP7.38□□□□□ -1.23
PAAF1-209ENST00000540659 RAB9AP51151 201 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 CFHR3Q02985 330 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 RELQ04864 619 aaPredicted RBP7.38□□□□□ -1.23
PAAF1-209ENST00000540659 ZNF343Q6P1L6 599 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 EXOC3-AS1Q8N2X6 119 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 FAM24BQ8N5W8 94 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 C15orf54Q8N8G6 183 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 OR4X2Q8NGF9 303 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 OR5B12Q96R08 314 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 ZNF702PQ9H963 129 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 URGCP-MRPS24S4R325 110 aa7.38□□□□□ -1.23
PAAF1-209ENST00000540659 MXRA5Q9NR99 2828 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 CUBNO60494 3623 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 TRBV20OR9-2A0A075B6H5 130 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 IGHV3OR16-13A0A075B7E8 117 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 A0A087WWC5 75 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 IGHV3-49A0A0A0MS15 119 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 IGHV3-74A0A0B4J1X5 117 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 TRAV34A0A0B4J273 112 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 ATF4P18848 351 aaPredicted RBP7.37□□□□□ -1.23
PAAF1-209ENST00000540659 GNG4P50150 75 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 CENPWQ5EE01 88 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 LINC01551Q86U37 167 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 OCC1Q8TAD7 63 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 SGK494Q96LW2 274 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 LINC00479Q96M42 142 aa7.37□□□□□ -1.23
PAAF1-209ENST00000540659 TRBV19A0A075B6N1 114 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.36□□□□□ -1.23
PAAF1-209ENST00000540659 DNAJC9-AS1A6NH13 148 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 COLCA2A8K830 154 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 SLC17A3O00476 420 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 MRPS12O15235 138 aaKnown RBP7.36□□□□□ -1.23
PAAF1-209ENST00000540659 CRLF1O75462 422 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 APOHP02749 345 aaPredicted RBP7.36□□□□□ -1.23
PAAF1-209ENST00000540659 MT-ND4LP03901 98 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 IGLC2P0DOY2 106 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 MGST1P10620 155 aaKnown RBP7.36□□□□□ -1.23
PAAF1-209ENST00000540659 MYCNOSP40205 109 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 CNN1P51911 297 aaKnown RBP7.36□□□□□ -1.23
PAAF1-209ENST00000540659 UBE2G1P62253 170 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 OR8I2Q8N0Y5 310 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 NHLRC2Q8NBF2 726 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 C2CD4CQ8TF44 421 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 HIST1H2BAQ96A08 127 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 OTORQ9NRC9 128 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 EPDR1Q9UM22 224 aa7.36□□□□□ -1.23
PAAF1-209ENST00000540659 TGIF2-C20orf24A0A0A6YYL0 155 aa7.35□□□□□ -1.23
PAAF1-209ENST00000540659 C9JCJ5 164 aa7.35□□□□□ -1.23
PAAF1-209ENST00000540659 H7BYZ3 331 aa7.35□□□□□ -1.23
PAAF1-209ENST00000540659 K7EN84 100 aa7.35□□□□□ -1.23
PAAF1-209ENST00000540659 IGHG4P01861 327 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms