RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 C8orf31Q8N9H6 132 aa13.53□□□□□ -0.24
EPB41L3-204ENST00000540638 C21orf62Q9NYP8 219 aa13.53□□□□□ -0.24
EPB41L3-204ENST00000540638 FBXL7Q9UJT9 491 aa13.53□□□□□ -0.24
EPB41L3-204ENST00000540638 SERTM2A0A1B0GWG4 89 aa13.52□□□□□ -0.24
EPB41L3-204ENST00000540638 TCRAP04437 139 aa13.52□□□□□ -0.24
EPB41L3-204ENST00000540638 MFAP4P55083 255 aa13.52□□□□□ -0.24
EPB41L3-204ENST00000540638 SLAQ13239 276 aa13.52□□□□□ -0.24
EPB41L3-204ENST00000540638 RCHY1Q96PM5 261 aa13.52□□□□□ -0.24
EPB41L3-204ENST00000540638 ZNF586Q9NXT0 402 aa13.52□□□□□ -0.24
EPB41L3-204ENST00000540638 ATG101Q9BSB4 218 aa13.52□□□□□ -0.25
EPB41L3-204ENST00000540638 TBL2Q9Y4P3 447 aaKnown RBP13.52□□□□□ -0.25
EPB41L3-204ENST00000540638 G3V318 75 aa13.52□□□□□ -0.25
EPB41L3-204ENST00000540638 SAA4P35542 130 aa13.52□□□□□ -0.25
EPB41L3-204ENST00000540638 PMCHL1Q16048 86 aa13.52□□□□□ -0.25
EPB41L3-204ENST00000540638 FBXL19-AS1Q494R0 122 aa13.52□□□□□ -0.25
EPB41L3-204ENST00000540638 AAMDCQ9H7C9 122 aa13.52□□□□□ -0.25
EPB41L3-204ENST00000540638 ZNF785A8K8V0 405 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 J3KRW8 73 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 K7EIM0 57 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 NDUFB8O95169 186 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 BRS3P32247 399 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 BORCS7Q96B45 105 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 THYN1Q9P016 225 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 NDUFS6O75380 124 aaKnown RBP13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 FAM106CPP0CH98 169 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 CRYBG3Q68DQ2 2970 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 SORL1Q92673 2214 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 HLA-DRB1P01911 266 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 CT45A10P0DMU9 189 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 LINC00322Q6ZN03 302 aaPredicted RBP13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 IGF2BP2-AS1Q96M15 143 aa13.51□□□□□ -0.25
EPB41L3-204ENST00000540638 I3L2K1 104 aa13.5□□□□□ -0.25
EPB41L3-204ENST00000540638 K7EQM0 130 aa13.5□□□□□ -0.25
EPB41L3-204ENST00000540638 NOTCH2Q04721 2471 aa13.5□□□□□ -0.25
EPB41L3-204ENST00000540638 IZUMO1RA6ND01 250 aa13.5□□□□□ -0.25
EPB41L3-204ENST00000540638 HLA-DQA1P01909 254 aa13.5□□□□□ -0.25
EPB41L3-204ENST00000540638 CSN1S1P47710 185 aa13.5□□□□□ -0.25
EPB41L3-204ENST00000540638 RPL11P62913 178 aaKnown RBP13.5□□□□□ -0.25
EPB41L3-204ENST00000540638 CELSR1Q9NYQ6 3014 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 TDRG1Q3Y452 100 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 TMEM136Q6ZRR5 245 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 YPEL3P61236 119 aaPredicted RBP13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 CLEC19AQ6UXS0 136 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 A1L4Q6 167 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 BMPR1BO00238 502 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 CRYGBP07316 175 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 Q8TAT8 98 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 NRGNQ92686 78 aa13.49□□□□□ -0.25
EPB41L3-204ENST00000540638 CFAP46Q8IYW2 2715 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 A0A1B0GV90 55 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 A8MWL6 223 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 GNB1LQ9BYB4 327 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 ITPR1Q14643 2758 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 IGKV2-40A0A087WW87 121 aaPredicted RBP13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 IGKV2D-40P01614 121 aaPredicted RBP13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 GP9P14770 177 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 ZNF138P52744 262 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 EFNA4P52798 201 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 Q6ZWC4 215 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 GRAMD2BQ96HH9 432 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 VAMP8Q9BV40 100 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 RPP21Q9H633 154 aaKnown RBP13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 LY96Q9Y6Y9 160 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 ARL2-SNX15V9GYD0 113 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 TRAV40A0A0B4J280 105 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 DIRC3C9JPN6 131 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 M0R2Z0 102 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 CRYGCP07315 174 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 TMEM183BQ1AE95 376 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 C15orf32Q32M92 178 aa13.48□□□□□ -0.25
EPB41L3-204ENST00000540638 M0R1W7 72 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 MT-ND6P03923 174 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 CLEC3BP05452 202 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 ATP5J2P56134 94 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 C1RLQ9NZP8 487 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 HOXB4P17483 251 aaPredicted RBP13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 HLA-DMBP28068 263 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 ZNF491Q8N8L2 437 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 OR11H6Q8NGC7 330 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 C14orf144Q96I85 54 aa13.47□□□□□ -0.25
EPB41L3-204ENST00000540638 LINC01548A6NM66 108 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 RHOGP84095 191 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 ZNF562Q6V9R5 426 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 MAPK1IP1LQ8NDC0 245 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 CFHR4Q92496 578 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 CHRDL1Q9BU40 450 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 NRN1Q9NPD7 142 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 TP53TG3Q9ULZ0 132 aa13.46□□□□□ -0.25
EPB41L3-204ENST00000540638 LY6LH3BQJ8 138 aa13.46□□□□□ -0.26
EPB41L3-204ENST00000540638 LY6G5BQ8NDX9 201 aa13.46□□□□□ -0.26
EPB41L3-204ENST00000540638 ITLN2Q8WWU7 325 aaPredicted RBP13.46□□□□□ -0.26
EPB41L3-204ENST00000540638 INS-IGF2F8WCM5 200 aa13.45□□□□□ -0.26
EPB41L3-204ENST00000540638 TSKUQ8WUA8 353 aa13.45□□□□□ -0.26
EPB41L3-204ENST00000540638 UTP20O75691 2785 aaKnown RBP13.45□□□□□ -0.26
EPB41L3-204ENST00000540638 ATP6V0E1O15342 81 aa13.45□□□□□ -0.26
EPB41L3-204ENST00000540638 COA6Q5JTJ3 125 aaKnown RBP13.45□□□□□ -0.26
EPB41L3-204ENST00000540638 C11orf71Q6IPW1 123 aa13.45□□□□□ -0.26
EPB41L3-204ENST00000540638 SOX21Q9Y651 276 aaPredicted RBP13.45□□□□□ -0.26
EPB41L3-204ENST00000540638 SCGB2A1O75556 95 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms