RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 MYO7AQ13402 2215 aa7.16□□□□□ -1.26
YBX3-208ENST00000540447 LINC01545Q5VT33 79 aa7.16□□□□□ -1.26
YBX3-208ENST00000540447 C20orf173Q96LM9 149 aa7.16□□□□□ -1.26
YBX3-208ENST00000540447 TRIP12Q14669 1992 aaPredicted RBP7.16□□□□□ -1.26
YBX3-208ENST00000540447 SHISA9B4DS77 424 aa7.15□□□□□ -1.26
YBX3-208ENST00000540447 PRSS46E5RG02 174 aa7.15□□□□□ -1.26
YBX3-208ENST00000540447 ZNF876PQ49A33 203 aa7.15□□□□□ -1.26
YBX3-208ENST00000540447 TRAV17A0A0B4J275 112 aa7.15□□□□□ -1.26
YBX3-208ENST00000540447 C2orf66Q6UXQ4 117 aa7.15□□□□□ -1.26
YBX3-208ENST00000540447 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
YBX3-208ENST00000540447 PSMB8P28062 276 aa7.15□□□□□ -1.26
YBX3-208ENST00000540447 ZIC4Q8N9L1 334 aa7.15□□□□□ -1.26
YBX3-208ENST00000540447 DNAJC13O75165 2243 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 FAM240AA0A1B0GVK7 77 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 COX6A1P12074 109 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 DAD1P61803 113 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 Q6ZRM9 215 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 WIPF2Q8TF74 440 aaPredicted RBP7.15□□□□□ -1.27
YBX3-208ENST00000540447 TMEM141Q96I45 108 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 LTBP3Q9NS15 1303 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 A0A087WX48 190 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 A4D1N5 150 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 K7EMI3 77 aa7.15□□□□□ -1.27
YBX3-208ENST00000540447 SMIM9A6NGZ8 99 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 CELA3BP08861 270 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 LINC01620Q4KN68 170 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 HIGD1BQ9P298 99 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 PAX9P55771 341 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 SPATA12Q7Z6I5 190 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 SRXN1Q9BYN0 137 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 ITGBL1O95965 494 aaPredicted RBP7.14□□□□□ -1.27
YBX3-208ENST00000540447 IGKV1D-33P01593 117 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 IGKV1-33P01594 117 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 C14orf178Q8N769 122 aaPredicted RBP7.14□□□□□ -1.27
YBX3-208ENST00000540447 IMMP1LQ96LU5 166 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 REPIN1Q9BWE0 567 aaKnown RBP7.14□□□□□ -1.27
YBX3-208ENST00000540447 TP53TG1Q9Y2A0 90 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 K7EN84 100 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 SUMO4Q6EEV6 95 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 LINC00173Q6ZV60 143 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 IGKV1-12A0A0C4DH73 117 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 F6UB75 175 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 TM4SF5O14894 197 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 IGKV1D-12P01611 117 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 ATP5J2P56134 94 aa7.14□□□□□ -1.27
YBX3-208ENST00000540447 SP7Q8TDD2 431 aaPredicted RBP7.14□□□□□ -1.27
YBX3-208ENST00000540447 TDRD6O60522 2096 aaKnown RBP7.14□□□□□ -1.27
YBX3-208ENST00000540447 CRYGBP07316 175 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 LRRC75A-AS1Q8N1F1 130 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 FAM110AQ9BQ89 295 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 J3QQQ9 107 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 DEFB109BQ30KR1 87 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 Q8TAT8 98 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 WBP1Q96G27 269 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 KNL1Q8NG31 2342 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 SPTSSBQ8NFR3 76 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 TRGV9Q99603 122 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 DENND4AQ7Z401 1863 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 CCDC179H3BU77 68 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 LYPD1Q8N2G4 141 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 C11orf52Q96A22 123 aa7.13□□□□□ -1.27
YBX3-208ENST00000540447 NHSQ6T4R5 1651 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 PRB1P04280 392 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 CFPP27918 469 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 MPLKIPQ8TAP9 179 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 IGHG3P01860 377 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 NBL1P41271 181 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 NRN1LQ496H8 165 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 ZNF493Q6ZR52 646 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 FAM90A1Q86YD7 464 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 C8orf31Q8N9H6 132 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 TAF1P21675 1872 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 FAM236DA0A1B0GTK5 79 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 NDUFA7O95182 113 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 FAM236CP0DP71 79 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 FGFBP3Q8TAT2 258 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 ANAPC10Q9UM13 185 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 RGPD8O14715 1765 aaPredicted RBP7.12□□□□□ -1.27
YBX3-208ENST00000540447 ANKRD36A6QL64 1941 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 M0R1W7 72 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 ALPK2Q86TB3 2170 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 DLEC1Q9Y238 1755 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 PSME4Q14997 1843 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 NDUFC2-KCTD14E9PQ53 114 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 GFRALQ6UXV0 394 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 WFDC11Q8NEX6 87 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 RGPD5Q99666 1765 aa7.12□□□□□ -1.27
YBX3-208ENST00000540447 LAMB2P55268 1798 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 TRAV3A0A0B4J244 114 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 CSRP2Q16527 193 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 CLEC19AQ6UXS0 136 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 TMEM219Q86XT9 240 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 INS-IGF2F8WCM5 200 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 INSP01308 110 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 IGLV3-21P80748 117 aaPredicted RBP7.11□□□□□ -1.27
YBX3-208ENST00000540447 NDUFA12Q9UI09 145 aa7.11□□□□□ -1.27
YBX3-208ENST00000540447 PDCD11Q14690 1871 aaKnown RBP7.11□□□□□ -1.27
YBX3-208ENST00000540447 CENPVQ7Z7K6 275 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms