RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 WRBO00258 174 aa9.98□□□□□ -0.81
SEMA4D-222ENST00000540183 NUDT3O95989 172 aa9.98□□□□□ -0.81
SEMA4D-222ENST00000540183 INSP01308 110 aa9.98□□□□□ -0.81
SEMA4D-222ENST00000540183 ANXA3P12429 323 aa9.98□□□□□ -0.81
SEMA4D-222ENST00000540183 SRPXP78539 464 aa9.98□□□□□ -0.81
SEMA4D-222ENST00000540183 FGL1Q08830 312 aa9.98□□□□□ -0.81
SEMA4D-222ENST00000540183 OR1B1Q8NGR6 318 aa9.98□□□□□ -0.81
SEMA4D-222ENST00000540183 LYRM9A8MSI8 78 aa9.97□□□□□ -0.81
SEMA4D-222ENST00000540183 F5H768 121 aa9.97□□□□□ -0.81
SEMA4D-222ENST00000540183 H3BP45 60 aa9.97□□□□□ -0.81
SEMA4D-222ENST00000540183 GGNBP1Q5YKI7 109 aa9.97□□□□□ -0.81
SEMA4D-222ENST00000540183 SOSTQ9BQB4 213 aa9.97□□□□□ -0.81
SEMA4D-222ENST00000540183 CCDC59Q9P031 241 aaKnown RBP9.97□□□□□ -0.81
SEMA4D-222ENST00000540183 LINC00588Q9Y4M8 146 aa9.97□□□□□ -0.81
SEMA4D-222ENST00000540183 DUSP14O95147 198 aaKnown RBP9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 VAMP1P23763 118 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 AKR1C1Q04828 323 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 SPANXN5Q5MJ07 72 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 SAMD13Q5VXD3 122 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 C6orf223Q8N319 242 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 ZNF738Q8NE65 137 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 BPIFCQ8NFQ6 507 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 TMEM147Q9BVK8 224 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 MRPS26Q9BYN8 205 aaKnown RBP9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 SLC45A2Q9UMX9 530 aa9.96□□□□□ -0.82
SEMA4D-222ENST00000540183 DUXBA0A1W2PPF3 345 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 H3BRN7 92 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 BOLA2-SMG1P6H3BVE0 249 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 SYNGR2O43760 224 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 HOXB5P09067 269 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 HTN1P15515 57 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 TNFSF8P32971 234 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 FAM3BP58499 235 aaPredicted RBP9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 HIST1H1AQ02539 215 aaPredicted RBP9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 ACOT7LQ6ZUV0 252 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 MAPKAPK5-AS1Q8N8E1 139 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 OR4D5Q8NGN0 318 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 RNF141Q8WVD5 230 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 RABL2AQ9UBK7 228 aaPredicted RBP9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 RSL24D1Q9UHA3 163 aaKnown RBP9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 RABL2BQ9UNT1 228 aa9.95□□□□□ -0.82
SEMA4D-222ENST00000540183 FABP12A6NFH5 140 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 MED6O75586 246 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 CCNKO75909 580 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 CFDP00746 253 aaPredicted RBP9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 SLC25A6P12236 298 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 PPP1R1AQ13522 171 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 TMEM128Q5BJH2 165 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 LRTM2Q8N967 370 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 TRIM63Q969Q1 353 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 UHRF2Q96PU4 802 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 LINC01587Q99440 93 aa9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 SLIRPQ9GZT3 109 aaKnown RBP9.94□□□□□ -0.82
SEMA4D-222ENST00000540183 SMCO3A2RU48 225 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 CDK2AP2O75956 126 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 SFT2D2O95562 160 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 ATP5G1P05496 136 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 TSPOP30536 169 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 ATP5G3P48201 142 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 RHOBP62745 196 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 KIR3DS1Q14943 382 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 CYP2G1PQ6ZSU1 146 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 OR8A1Q8NGG7 326 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 GPR82Q96P67 336 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 CIB3Q96Q77 187 aaPredicted RBP9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 SHANK2-AS3Q9BTD1 123 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 PARD6GQ9BYG4 376 aaPredicted RBP9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 KRTAP1-5Q9BYS1 174 aa9.93□□□□□ -0.82
SEMA4D-222ENST00000540183 SNRPCP09234 159 aaKnown RBP9.92□□□□□ -0.82
SEMA4D-222ENST00000540183 CXCL3P19876 107 aa9.92□□□□□ -0.82
SEMA4D-222ENST00000540183 TMEM144Q7Z5S9 345 aa9.92□□□□□ -0.82
SEMA4D-222ENST00000540183 RAB2BQ8WUD1 216 aa9.92□□□□□ -0.82
SEMA4D-222ENST00000540183 HIGD1AQ9Y241 93 aa9.92□□□□□ -0.82
SEMA4D-222ENST00000540183 CBY3A6NI87 242 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 ADAP1O75689 374 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 IL5P05113 134 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 OR5G3P0C626 314 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 LINC00869P0C866 280 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 CCL18P55774 89 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 B2MP61769 119 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 RRAS2P62070 204 aaPredicted RBP9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 POLR2GP62487 172 aaKnown RBP eCLIP9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 RPP30P78346 268 aaKnown RBP9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 PSG3Q16557 428 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 SSX7Q7RTT5 188 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 SPATA12Q7Z6I5 190 aa9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 NOP10Q9NPE3 64 aaKnown RBP9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 STRAPQ9Y3F4 350 aaKnown RBP9.91□□□□□ -0.82
SEMA4D-222ENST00000540183 PMS2P5A8MQ11 134 aa9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 H3BMQ9 156 aa9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 MRPS12O15235 138 aaKnown RBP9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 HYPMO75409 117 aa9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 RPL7P18124 248 aaKnown RBP9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 FAUP35544 74 aaKnown RBP9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 TAS2R60P59551 318 aa9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 PYDC2Q56P42 97 aa9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 TOMM5Q8N4H5 51 aa9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 MCFD2Q8NI22 146 aa9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 C16orf74Q96GX8 76 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms