RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GPR183P32249 361 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 HAPLN4Q86UW8 402 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 ORMDL3Q8N138 153 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 CIARTQ8N365 385 aaPredicted RBP8.12□□□□□ -1.11
TRAF1-202ENST00000540010 DPM3Q9P2X0 92 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 TRAV30A0A087WSZ9 112 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 THBDP07204 575 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 MPV17L2Q567V2 206 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 OR10J3Q5JRS4 329 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 FOXC2Q99958 501 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 PMS2P5A8MQ11 134 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 TYMSP04818 313 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 CFHR2P36980 270 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 CACNG7P62955 275 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 LY6EQ16553 131 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 TMEM30BQ3MIR4 351 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 OR10J6PQ8NGY7 276 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 C21orf62Q9NYP8 219 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 LSM4Q9Y4Z0 139 aaKnown RBP8.12□□□□□ -1.11
TRAF1-202ENST00000540010 LOC105371242A0A075B767 164 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 PSG9Q00887 426 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 LY6DQ14210 128 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 FMC1Q96HJ9 113 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 MEGF9Q9H1U4 602 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 SPCS1Q9Y6A9 102 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 DMXL2Q8TDJ6 3036 aa8.12□□□□□ -1.11
TRAF1-202ENST00000540010 NPIPB5A8MRT5 1133 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 OR11H12B2RN74 326 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 KLF17Q5JT82 389 aaPredicted RBP8.11□□□□□ -1.11
TRAF1-202ENST00000540010 AMMECR1LQ6DCA0 310 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 NUP35Q8NFH5 326 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 OR11H1Q8NG94 326 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 OR11H2Q8NH07 326 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 NEUROG1Q92886 237 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.11□□□□□ -1.11
TRAF1-202ENST00000540010 C9JCJ5 164 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 NPPCP23582 126 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 GATA4P43694 442 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 MEF2CQ06413 473 aaPredicted RBP8.11□□□□□ -1.11
TRAF1-202ENST00000540010 SONP18583 2426 aaKnown RBP8.11□□□□□ -1.11
TRAF1-202ENST00000540010 DPF1Q92782 380 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 FBXL7Q9UJT9 491 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 PSG8Q9UQ74 426 aa8.11□□□□□ -1.11
TRAF1-202ENST00000540010 SFTPCP11686 197 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 RPS20P60866 119 aaKnown RBP8.1□□□□□ -1.11
TRAF1-202ENST00000540010 DUX4L9Q6RFH8 374 aaPredicted RBP8.1□□□□□ -1.11
TRAF1-202ENST00000540010 FER1L6-AS1Q8NA97 138 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 A0A087X0K7 114 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 PSG1P11464 419 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 HIST1H1AQ02539 215 aaPredicted RBP8.1□□□□□ -1.11
TRAF1-202ENST00000540010 RNF125Q96EQ8 232 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 SCRT1Q9BWW7 348 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 TSPOP30536 169 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 APOBEC3AP31941 199 aaPredicted RBP8.1□□□□□ -1.11
TRAF1-202ENST00000540010 DLX6P56179 175 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 BEX4Q9NWD9 120 aaPredicted RBP8.1□□□□□ -1.11
TRAF1-202ENST00000540010 NHP2Q9NX24 153 aaKnown RBP8.1□□□□□ -1.11
TRAF1-202ENST00000540010 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
TRAF1-202ENST00000540010 SH2D7A6NKC9 451 aaPredicted RBP8.1□□□□□ -1.11
TRAF1-202ENST00000540010 RNASE6Q93091 150 aaKnown RBP8.1□□□□□ -1.11
TRAF1-202ENST00000540010 B9A039 149 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 TGFAP01135 160 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 LHBP01229 141 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 EVI2AP22794 236 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 LYPD6BQ8NI32 183 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 TMEM133Q9H2Q1 129 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 A6NJY4 79 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 NDUFA3O95167 84 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 APOMO95445 188 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 NCR2O95944 276 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 IGLV2-14P01704 120 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 JKAMPQ9P055 326 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 SOX21Q9Y651 276 aaPredicted RBP8.09□□□□□ -1.11
TRAF1-202ENST00000540010 E7EQL1 145 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 C15orf65H3BRN8 121 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 TMEM170BQ5T4T1 132 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 TTC9CQ8N5M4 171 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 DEFB104AQ8WTQ1 72 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 SMIM12Q96EX1 92 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 GAFA1Q96PS6 74 aa8.09□□□□□ -1.11
TRAF1-202ENST00000540010 KLF2Q9Y5W3 355 aaPredicted RBP8.09□□□□□ -1.11
TRAF1-202ENST00000540010 CHD8Q9HCK8 2581 aa8.09□□□□□ -1.12
TRAF1-202ENST00000540010 A0A1B0GWJ7 208 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 FAM90A9PA6NNJ1 464 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 RIPPLY3P57055 190 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 OTORQ9NRC9 128 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 ZNF257Q9Y2Q1 563 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 A0A1W2PS18 150 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 NPSP0C0P6 89 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 LEPP41159 167 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 UNQ6494/PRO21346Q6UXR6 183 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 CLEC19AQ6UXS0 136 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 ZNF418Q8TF45 676 aaPredicted RBP8.08□□□□□ -1.12
TRAF1-202ENST00000540010 MYO9AB2RTY4 2548 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 ZFHX4Q86UP3 3567 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 LAMA5O15230 3695 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 A0A1B0GWB2 263 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms