RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 UNQ5815/PRO19632Q6UWF5 114 aa13.27□□□□□ -0.29
COPS3-212ENST00000539941 OR4B1Q8NGF8 309 aa13.27□□□□□ -0.29
COPS3-212ENST00000539941 GATAD1Q8WUU5 269 aa13.27□□□□□ -0.29
COPS3-212ENST00000539941 ZNF48Q96MX3 618 aaPredicted RBP13.27□□□□□ -0.29
COPS3-212ENST00000539941 ABCA1O95477 2261 aa13.27□□□□□ -0.29
COPS3-212ENST00000539941 PPBPP02775 128 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 OR5G3P0C626 314 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 STAG3L2P0CL84 134 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 STAG3L3P0CL85 134 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 CD99P14209 185 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 PSMB3P49720 205 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 LY6EQ16553 131 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 OR1L4Q8NGR5 311 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 VAMP8Q9BV40 100 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
COPS3-212ENST00000539941 BCL6BQ8N143 479 aaPredicted RBP13.25□□□□□ -0.29
COPS3-212ENST00000539941 SMIM7Q9BQ49 75 aa13.25□□□□□ -0.29
COPS3-212ENST00000539941 MRPL32Q9BYC8 188 aaKnown RBP13.25□□□□□ -0.29
COPS3-212ENST00000539941 FUT9Q9Y231 359 aa13.25□□□□□ -0.29
COPS3-212ENST00000539941 NF1P21359 2839 aa13.25□□□□□ -0.29
COPS3-212ENST00000539941 CSPG4Q6UVK1 2322 aa13.25□□□□□ -0.29
COPS3-212ENST00000539941 IGHV3-21A0A0B4J1V1 117 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 PSMB11A5LHX3 300 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 HMGB3O15347 200 aaKnown RBP13.24□□□□□ -0.29
COPS3-212ENST00000539941 CXorf1O96002 111 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 IGLC1P0CG04 106 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 GATA2P23769 480 aaPredicted RBP13.24□□□□□ -0.29
COPS3-212ENST00000539941 ZNF90Q03938 601 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 ADIRFQ15847 76 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 ECSCRQ19T08 205 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 OR5T1Q8NG75 326 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 TRAV30A0A087WSZ9 112 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 MDFIC2A0A1B0GVS7 189 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 TOMM40O96008 361 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 IGHG2P01859 326 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 ESDP10768 282 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 IER3P46695 156 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 MFAP4P55083 255 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 FAM78BQ5VT40 261 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 TMEM37Q8WXS4 190 aa13.24□□□□□ -0.29
COPS3-212ENST00000539941 SEPSECSQ9HD40 501 aaKnown RBP13.24□□□□□ -0.29
COPS3-212ENST00000539941 IGF1P05019 195 aa13.23□□□□□ -0.29
COPS3-212ENST00000539941 FCGR2BP31994 310 aaPredicted RBP13.23□□□□□ -0.29
COPS3-212ENST00000539941 TAS2R45P59539 299 aa13.23□□□□□ -0.29
COPS3-212ENST00000539941 PLP1P60201 277 aa13.23□□□□□ -0.29
COPS3-212ENST00000539941 C19orf54Q5BKX5 351 aa13.23□□□□□ -0.29
COPS3-212ENST00000539941 CIARTQ8N365 385 aaPredicted RBP13.23□□□□□ -0.29
COPS3-212ENST00000539941 VN1R17PQ8TDU5 208 aa13.23□□□□□ -0.29
COPS3-212ENST00000539941 TXN2Q99757 166 aa13.23□□□□□ -0.29
COPS3-212ENST00000539941 NIPBLQ6KC79 2804 aaeCLIP13.23□□□□□ -0.29
COPS3-212ENST00000539941 TRAV41A0A0B4J266 112 aa13.22□□□□□ -0.29
COPS3-212ENST00000539941 SH2D7A6NKC9 451 aaPredicted RBP13.22□□□□□ -0.29
COPS3-212ENST00000539941 COX7A2P2O60397 106 aa13.22□□□□□ -0.29
COPS3-212ENST00000539941 SCGB2A1O75556 95 aa13.22□□□□□ -0.29
COPS3-212ENST00000539941 ARL14EPLP0DKL9 152 aa13.22□□□□□ -0.29
COPS3-212ENST00000539941 TOMM20LQ6UXN7 152 aa13.22□□□□□ -0.29
COPS3-212ENST00000539941 Q6YL49 198 aa13.22□□□□□ -0.29
COPS3-212ENST00000539941 TECRQ9NZ01 308 aaKnown RBP13.22□□□□□ -0.29
COPS3-212ENST00000539941 ZNF580Q9UK33 172 aa13.22□□□□□ -0.29
COPS3-212ENST00000539941 FLNAP21333 2647 aaKnown RBP13.22□□□□□ -0.29
COPS3-212ENST00000539941 SVEP1Q4LDE5 3571 aa13.22□□□□□ -0.29
COPS3-212ENST00000539941 TRBV9A0A0B4J1U6 114 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 LINC01548A6NM66 108 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 IGHV4-59P01825 116 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 C10orf113Q5VZT2 155 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 PQLC2Q6ZP29 291 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 CMTM2Q8TAZ6 248 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 C21orf62Q9NYP8 219 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 FBXL7Q9UJT9 491 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 C2CD3Q4AC94 2353 aa13.21□□□□□ -0.29
COPS3-212ENST00000539941 TRAV9-1A0A075B6T8 112 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 SMAD7O15105 426 aaKnown RBP13.21□□□□□ -0.3
COPS3-212ENST00000539941 CIDEAO60543 219 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 OR2J3O76001 311 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 NDUFB8O95169 186 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 BRI3O95415 125 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 IGKV1-17P01599 117 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 RIPPLY3P57055 190 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 RPL23P62829 140 aaKnown RBP13.21□□□□□ -0.3
COPS3-212ENST00000539941 MIR17HGQ75NE6 70 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 NECAP1Q8NC96 275 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 TXNDC17Q9BRA2 123 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 UQCR10Q9UDW1 63 aa13.21□□□□□ -0.3
COPS3-212ENST00000539941 G3V318 75 aa13.2□□□□□ -0.3
COPS3-212ENST00000539941 GNG7O60262 68 aa13.2□□□□□ -0.3
COPS3-212ENST00000539941 C8orf88P0DMB2 117 aa13.2□□□□□ -0.3
COPS3-212ENST00000539941 GCHFRP30047 84 aa13.2□□□□□ -0.3
COPS3-212ENST00000539941 UBE2G2P60604 165 aa13.2□□□□□ -0.3
COPS3-212ENST00000539941 YPEL3P61236 119 aaPredicted RBP13.2□□□□□ -0.3
COPS3-212ENST00000539941 MEF2BQ02080 365 aaPredicted RBP13.2□□□□□ -0.3
COPS3-212ENST00000539941 TIGITQ495A1 244 aa13.2□□□□□ -0.3
COPS3-212ENST00000539941 RNASE8Q8TDE3 154 aaKnown RBP13.2□□□□□ -0.3
COPS3-212ENST00000539941 VPREB3Q9UKI3 123 aa13.2□□□□□ -0.3
COPS3-212ENST00000539941 TRAPPC1Q9Y5R8 145 aa13.2□□□□□ -0.3
COPS3-212ENST00000539941 HSBP1L1C9JCN9 74 aa13.19□□□□□ -0.3
COPS3-212ENST00000539941 F6UZH7 168 aa13.19□□□□□ -0.3
COPS3-212ENST00000539941 H3BUA1 57 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms