RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 LINC00869P0C866 280 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 ZNF705DP0CH99 300 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 ZNF705BP0CI00 300 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 S100A7P31151 101 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 TCTAP57738 103 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 DLK1P80370 383 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 FGL1Q08830 312 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 SPATA31B1PQ5VZV4 182 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 CLUHP3Q96NS8 147 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 NDUFA13Q9P0J0 144 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 HIGD1AQ9Y241 93 aa13.7□□□□□ -0.22
TNFRSF1A-212ENST00000539372 TRAV6A0A075B6T7 132 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 HYPMO75409 117 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 MBPP02686 304 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 OR5G3P0C626 314 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 RAP2BP61225 183 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 CNPY1Q3B7I2 92 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 OR10P1Q8NGE3 313 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 GPR82Q96P67 336 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 NEU1Q99519 415 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 SHANK2-AS3Q9BTD1 123 aa13.69□□□□□ -0.22
TNFRSF1A-212ENST00000539372 IGHV4-4A0A075B6R2 117 aa13.68□□□□□ -0.22
TNFRSF1A-212ENST00000539372 TSC22D2O75157 780 aa13.68□□□□□ -0.22
TNFRSF1A-212ENST00000539372 SLC38A11Q08AI6 406 aa13.68□□□□□ -0.22
TNFRSF1A-212ENST00000539372 RNF182Q8N6D2 247 aa13.68□□□□□ -0.22
TNFRSF1A-212ENST00000539372 UHRF2Q96PU4 802 aa13.68□□□□□ -0.22
TNFRSF1A-212ENST00000539372 MGAT4CQ9UBM8 478 aa13.68□□□□□ -0.22
TNFRSF1A-212ENST00000539372 DEFB131BA0A096LNP1 70 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 TRAV8-2A0A0B4J237 113 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 SMIM9A6NGZ8 99 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 FAM25EA8MYX2 175 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 TCRBP04435 133 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 TAS2R30P59541 319 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 ARL16Q0P5N6 197 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 SEC22CQ9BRL7 303 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 NPVFQ9HCQ7 196 aa13.67□□□□□ -0.22
TNFRSF1A-212ENST00000539372 C7orf66A4D0T2 115 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 PLP1P60201 277 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 SELENOTP62341 195 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 TEPPQ6URK8 271 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 ARL6Q9H0F7 186 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 NUDT15Q9NV35 164 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 GOLT1BQ9Y3E0 138 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 RFNGQ9Y644 331 aa13.66□□□□□ -0.22
TNFRSF1A-212ENST00000539372 FRAS1Q86XX4 4008 aa13.65□□□□□ -0.22
TNFRSF1A-212ENST00000539372 FNDC10F2Z333 226 aa13.65□□□□□ -0.22
TNFRSF1A-212ENST00000539372 SPART-AS1P0CW21 52 aa13.65□□□□□ -0.22
TNFRSF1A-212ENST00000539372 RPL7P18124 248 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-212ENST00000539372 ZNF846Q147U1 533 aa13.65□□□□□ -0.22
TNFRSF1A-212ENST00000539372 PATE2Q6UY27 113 aa13.65□□□□□ -0.22
TNFRSF1A-212ENST00000539372 RNF126Q9BV68 326 aa13.65□□□□□ -0.22
TNFRSF1A-212ENST00000539372 LSM5Q9Y4Y9 91 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1A-212ENST00000539372 TMEM189A5PLL7 270 aa13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 C5orf51A6NDU8 294 aa13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 L7N2F9 121 aa13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 PRB4P10163 310 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 VAMP2P63027 116 aa13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 AMTNQ6UX39 209 aa13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 ZNF738Q8NE65 137 aa13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 ZNF431Q8TF32 576 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-212ENST00000539372 A8MTW9 85 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 K7EPK0 472 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 GOSR2O14653 212 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 AGPAT2O15120 278 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 HBE1P02100 147 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 BCAP31P51572 246 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 FAM222AQ5U5X8 452 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 OR11H7Q8NGC8 314 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 CCDC32Q9BV29 185 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 ARV1Q9H2C2 271 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 PLA2G2EQ9NZK7 142 aa13.63□□□□□ -0.23
TNFRSF1A-212ENST00000539372 VPS13DQ5THJ4 4388 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 LOC102723971A0A1B0GUV8 181 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 M0R2Z0 102 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 DUSP14O95147 198 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 AMBPP02760 352 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 H2AFB2P0C5Z0 115 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 SPINK13Q1W4C9 94 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 ZNF546Q86UE3 836 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 C12orf45Q8N5I9 185 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 MGST2Q99735 147 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 TMEM208Q9BTX3 173 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 GGACTQ9BVM4 153 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 DKK2Q9UBU2 259 aa13.62□□□□□ -0.23
TNFRSF1A-212ENST00000539372 A0A087X0K7 114 aa13.61□□□□□ -0.23
TNFRSF1A-212ENST00000539372 SNRPCP09234 159 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-212ENST00000539372 CAV2P51636 162 aa13.61□□□□□ -0.23
TNFRSF1A-212ENST00000539372 S100A7AQ86SG5 101 aa13.61□□□□□ -0.23
TNFRSF1A-212ENST00000539372 LRRC20Q8TCA0 184 aa13.61□□□□□ -0.23
TNFRSF1A-212ENST00000539372 IGF2BP2-AS1Q96M15 143 aa13.61□□□□□ -0.23
TNFRSF1A-212ENST00000539372 FAM240BA0A1B0GVZ2 78 aa13.6□□□□□ -0.23
TNFRSF1A-212ENST00000539372 FAM24AA6NFZ4 105 aa13.6□□□□□ -0.23
TNFRSF1A-212ENST00000539372 CST7O76096 145 aa13.6□□□□□ -0.23
TNFRSF1A-212ENST00000539372 PRM2P04554 102 aa13.6□□□□□ -0.23
TNFRSF1A-212ENST00000539372 CXCL3P19876 107 aa13.6□□□□□ -0.23
TNFRSF1A-212ENST00000539372 HIST1H1AQ02539 215 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-212ENST00000539372 RRN3P1Q2M238 152 aa13.6□□□□□ -0.23
TNFRSF1A-212ENST00000539372 LINC00305Q7Z4B0 112 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms