RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PBOV1Q9GZY1 135 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 BOLA2Q9H3K6 86 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 RASL12Q9NYN1 266 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 TAS2R7Q9NYW3 318 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 C22orf24Q9Y442 160 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 ASB4Q9Y574 426 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 LY96Q9Y6Y9 160 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 POLEQ07864 2286 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 MYH11P35749 1972 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 COL4A5P29400 1685 aa0.68□□□□□ -2.3
CCDC7-209ENST00000539197 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
CCDC7-209ENST00000539197 TLCD2A6NGC4 264 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 M0R2N4 97 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 CCL16O15467 120 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 IFNA14P01570 189 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 IGLV1-51P01701 117 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 APOA2P02652 100 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 FABP1P07148 127 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 IDO1P14902 403 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 SERPINB1P30740 379 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 TCTAP57738 103 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 VBP1P61758 197 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 FKBP1CQ5VVH2 108 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 IFT20Q8IY31 132 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 FAM24BQ8N5W8 94 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 ST6GALNAC3Q8NDV1 305 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 OR5D14Q8NGL3 314 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 DYDC1Q8WWB3 177 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 POP5Q969H6 163 aaKnown RBP0.67□□□□□ -2.3
CCDC7-209ENST00000539197 CHCHD1Q96BP2 118 aaKnown RBP0.67□□□□□ -2.3
CCDC7-209ENST00000539197 MALSU1Q96EH3 234 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 TMEM70Q9BUB7 260 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 GGACTQ9BVM4 153 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 OR52A1Q9UKL2 312 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 RNF11Q9Y3C5 154 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 DOCK3Q8IZD9 2030 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 CEP164Q9UPV0 1460 aa0.67□□□□□ -2.3
CCDC7-209ENST00000539197 ARHGEF28Q8N1W1 1705 aaKnown RBP0.67□□□□□ -2.3
CCDC7-209ENST00000539197 TRAV10A0A0B4J240 114 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 E7EUB6 86 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 M0R233 179 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 CCL25O15444 150 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 DNAL4O96015 105 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 SPRNQ5BIV9 151 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 C1orf140Q5VVS0 124 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 C4orf22Q6V702 233 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 NUP35Q8NFH5 326 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 OR5D16Q8NGK9 328 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 Q8TAT8 98 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 PATE1Q8WXA2 126 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 BORCS5Q969J3 196 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 RAB37Q96AX2 223 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 PLEKHB2Q96CS7 222 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 PCBD2Q9H0N5 130 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 CACYBPQ9HB71 228 aaKnown RBP0.66□□□□□ -2.3
CCDC7-209ENST00000539197 BIN3Q9NQY0 253 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 MED11Q9P086 117 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 HEATR5BQ9P2D3 2071 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 ECM29Q5VYK3 1845 aa0.66□□□□□ -2.3
CCDC7-209ENST00000539197 ALPK2Q86TB3 2170 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 MAP1LC3B2A6NCE7 125 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 PPP5D1E7EU14 171 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 C17orf112F2Z3M2 114 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 INE1O15225 51 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 RER1O15258 196 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 KLF7O75840 302 aaPredicted RBP0.65□□□□□ -2.31
CCDC7-209ENST00000539197 OR10J4P0C629 311 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 DSCR4P56555 118 aaPredicted RBP0.65□□□□□ -2.31
CCDC7-209ENST00000539197 CDK6Q00534 326 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 RTL8BQ17RB0 113 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 MPV17LQ2QL34 196 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 FAM74A1Q5RGS3 127 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 GDF5OSQ5U4N7 250 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 DCUN1D2Q6PH85 259 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 C2orf82Q6UX34 121 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 ZNF833PQ6ZTB9 187 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 C4orf3Q8WVX3 66 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 TP53RKQ96S44 253 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 RTL8AQ9BWD3 113 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 MAP1LC3BQ9GZQ8 125 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 OTORQ9NRC9 128 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 PLXND1Q9Y4D7 1925 aa0.65□□□□□ -2.31
CCDC7-209ENST00000539197 UHRF1BP1Q6BDS2 1440 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 ARHGEF11O15085 1522 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 CACNA1BQ00975 2339 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 TRBV6-4A0A1B0GX49 114 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 OR2T8A6NH00 312 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 GPR31O00270 319 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 HIST1H2BKO60814 126 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 ERC2-IT1O76042 136 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 HIST1H2BJP06899 126 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 RAB5CP51148 216 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 HBBP68871 147 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 KLRD1Q13241 179 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 EIF3IQ13347 325 aaKnown RBP0.64□□□□□ -2.31
CCDC7-209ENST00000539197 KRTAP26-1Q6PEX3 210 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 TMEM14EPQ6UXP3 125 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 PHF5AQ7RTV0 110 aaKnown RBP0.64□□□□□ -2.31
CCDC7-209ENST00000539197 STX12Q86Y82 276 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 MUCL1Q96DR8 90 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms