RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 DNAJC27Q9NZQ0 273 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 GAGE2DQ9UEU5 116 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 NUFIP1Q9UHK0 495 aaKnown RBP1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 HIGD1AQ9Y241 93 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 TNCP24821 2201 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 PKD1L1Q8TDX9 2849 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 DNAH7Q8WXX0 4024 aa1.41□□□□□ -2.18
CBX3P4-201ENST00000538909 DNAH9Q9NYC9 4486 aa1.4□□□□□ -2.18
CBX3P4-201ENST00000538909 NBEAL1Q6ZS30 2694 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 IGKV1-27A0A075B6S5 117 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 A0A087WXM4 84 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 IGKV1-9A0A0C4DH69 117 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM269A0A1B0GVZ9 245 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 A0A1B0GW64 132 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 A0A1B0GX51 115 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 DUXBA0A1W2PPF3 345 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 hADV38S2A0JD32 116 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 C7orf71A4D174 169 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 IFITM5A6NNB3 132 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 C15orf61A6NNL5 157 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 SRRM4A7MD48 611 aaKnown RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 SNURFLB1AK76 121 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 K7EPK0 472 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 M0R135 149 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF593O00488 134 aaPredicted RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 XKRYO14609 159 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 PIN1P1O15428 100 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 DEDDO75618 318 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 UPK1BO75841 260 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 DHRS3O75911 302 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 MPC2O95563 127 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 NRASP01111 189 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 LHBP01229 141 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 PTHP01270 115 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 IGHV1-46P01743 117 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 IGHV2-5P01817 119 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 MT-ND4LP03901 98 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 CSN2P05814 226 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 FAM106CPP0CH98 169 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 PSG2P11465 335 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 SPNP16150 400 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 BCL3P20749 454 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 BLVRBP30043 206 aaPredicted RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 MPV17P39210 176 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 TFPI2P48307 235 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 UBE2E1P51965 193 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 NDUFA6P56556 154 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 TPPP2P59282 170 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 TAS2R20P59543 309 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 GABARAPL2P60520 117 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 UBA52P62987 128 aaKnown RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 GRB2P62993 217 aaKnown RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 MEF2BQ02080 365 aaPredicted RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 HSD52Q0P140 79 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM267Q0VDI3 215 aaPredicted RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 PSG7Q13046 419 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 PMAIP1Q13794 54 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 C1DQ13901 141 aaKnown RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 HES1Q14469 280 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 LAGE3Q14657 143 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 MEF2DQ14814 521 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 MMDQ15546 238 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 ECSCRQ19T08 205 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 IQCJQ1A5X6 159 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM241Q24JQ0 296 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 GSG1Q2KHT4 349 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 FAM106AQ4KMX7 169 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 SPRNQ5BIV9 151 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 Q5BKY6 102 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 GLYATL3Q5SZD4 288 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 PRSS54Q6PEW0 395 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF773Q6PK81 442 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 HRCT1Q6UXD1 115 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 IL34Q6ZMJ4 242 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 Q6ZN92 141 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 GDPGP1Q6ZNW5 385 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC35E3Q7Z769 313 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 WDR86Q86TI4 376 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 LRP11Q86VZ4 500 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 PPP1R27Q86WC6 154 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF695Q8IW36 515 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 C1orf174Q8IYL3 243 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 OR5AS1Q8N127 324 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 FAM71E2Q8N5Q1 922 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 ANKRD29Q8N6D5 301 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 FER1L6-AS1Q8NA97 138 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 C5orf17Q8NAS9 161 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 OR4S1Q8NGB4 309 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 OR10AD1Q8NGE0 317 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 OR8B12Q8NGG6 310 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 OR2T27Q8NH04 317 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 OR10AC1Q8NH08 325 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 OR1L1Q8NH94 360 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNRF2Q8NHG8 242 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 KLF14Q8TD94 323 aaPredicted RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF431Q8TF32 576 aaPredicted RBP1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 LRRC29Q8WV35 223 aa1.4□□□□□ -2.19
CBX3P4-201ENST00000538909 PP6455Q8WZ26 134 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms