RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 GNG7O60262 68 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 HOXB4P17483 251 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-204ENST00000538492 KRTDAPP60985 99 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 Q86TA4 180 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 BPIFA4PQ86YQ2 179 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 FANCD2OSQ96PS1 177 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 UBTD1Q9HAC8 227 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 H3BRN7 92 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 FAM19A2Q8N3H0 131 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 C18orf32Q8TCD1 76 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 PRSS22Q9GZN4 317 aa19.61■□□□□ 0.73
RAB40C-204ENST00000538492 C19orf71A6NCJ1 209 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 FCGR2BP31994 310 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-204ENST00000538492 ZNF562Q6V9R5 426 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 OR2D3Q8NGH3 330 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 GTSF1Q8WW33 167 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 DAZAP1Q96EP5 407 aaKnown RBP19.6■□□□□ 0.73
RAB40C-204ENST00000538492 ASCL2Q99929 193 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 TRBV19A0A075B6N1 114 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 IGLV2-11P01706 119 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 CCDC144NLQ6NUI1 221 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 NRN1Q9NPD7 142 aa19.6■□□□□ 0.73
RAB40C-204ENST00000538492 IGHV3-23P01764 117 aa19.59■□□□□ 0.73
RAB40C-204ENST00000538492 OR4F17Q8NGA8 305 aa19.59■□□□□ 0.73
RAB40C-204ENST00000538492 IGLV11-55A0A075B6I3 123 aa19.59■□□□□ 0.73
RAB40C-204ENST00000538492 A0A1B0GV90 55 aa19.59■□□□□ 0.73
RAB40C-204ENST00000538492 PGLYRP4Q96LB8 373 aa19.59■□□□□ 0.73
RAB40C-204ENST00000538492 KIR2DL5BA0A0G2JN68 375 aa19.58■□□□□ 0.73
RAB40C-204ENST00000538492 KIR2DL5BA0A0G2JPC4 375 aa19.58■□□□□ 0.73
RAB40C-204ENST00000538492 A8MWL6 223 aa19.58■□□□□ 0.73
RAB40C-204ENST00000538492 ZNF324O75467 553 aaPredicted RBP19.58■□□□□ 0.73
RAB40C-204ENST00000538492 KIR2DL5AQ8N109 375 aa19.58■□□□□ 0.73
RAB40C-204ENST00000538492 ZMAT5Q9UDW3 170 aaKnown RBP19.58■□□□□ 0.73
RAB40C-204ENST00000538492 IGLC2P0DOY2 106 aa19.58■□□□□ 0.72
RAB40C-204ENST00000538492 C1orf122Q6ZSJ8 110 aa19.58■□□□□ 0.72
RAB40C-204ENST00000538492 ZNF492Q9P255 531 aa19.58■□□□□ 0.72
RAB40C-204ENST00000538492 NTF3P20783 257 aa19.57■□□□□ 0.72
RAB40C-204ENST00000538492 Q56UQ5 140 aa19.57■□□□□ 0.72
RAB40C-204ENST00000538492 A0A1B0GXF2 115 aa19.57■□□□□ 0.72
RAB40C-204ENST00000538492 NPIPB5A8MRT5 1133 aa19.57■□□□□ 0.72
RAB40C-204ENST00000538492 HLA-DRB1P01911 266 aa19.57■□□□□ 0.72
RAB40C-204ENST00000538492 TEX43Q6ZNM6 134 aa19.57■□□□□ 0.72
RAB40C-204ENST00000538492 TMEM11P17152 192 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 COL8A1P27658 744 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 MFAP4P55083 255 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 ATP5L2Q7Z4Y8 100 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 PAM16Q9Y3D7 125 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 ZFHX3Q15911 3703 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 WI2-2373I1.2A0A1W2PRP0 233 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 SIGLEC15Q6ZMC9 328 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 Q8N6K4 173 aa19.56■□□□□ 0.72
RAB40C-204ENST00000538492 F8W735 103 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-204ENST00000538492 HBBP68871 147 aa19.55■□□□□ 0.72
RAB40C-204ENST00000538492 ALKBH7Q9BT30 221 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-204ENST00000538492 SIRPDQ9H106 197 aa19.55■□□□□ 0.72
RAB40C-204ENST00000538492 OR2J3O76001 311 aa19.54■□□□□ 0.72
RAB40C-204ENST00000538492 CT83Q5H943 113 aa19.54■□□□□ 0.72
RAB40C-204ENST00000538492 TTC9CQ8N5M4 171 aa19.54■□□□□ 0.72
RAB40C-204ENST00000538492 NDUFB8O95169 186 aa19.54■□□□□ 0.72
RAB40C-204ENST00000538492 ZNF414Q96IQ9 312 aa19.54■□□□□ 0.72
RAB40C-204ENST00000538492 C21orf62Q9NYP8 219 aa19.54■□□□□ 0.72
RAB40C-204ENST00000538492 VPS13CQ709C8 3753 aa19.54■□□□□ 0.72
RAB40C-204ENST00000538492 TRAV30A0A087WSZ9 112 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 DIRC3C9JPN6 131 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 M0R3E3 92 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 MRPS12O15235 138 aaKnown RBP19.53■□□□□ 0.72
RAB40C-204ENST00000538492 UQCRFS1P47985 274 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 MINOS1Q5TGZ0 78 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 NIT1Q86X76 327 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 LINC00469Q8N7U9 141 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 MINOS1-NBL1R4GNA1 71 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 EREGO14944 169 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 FAM120AOSQ5T036 256 aa19.53■□□□□ 0.72
RAB40C-204ENST00000538492 OR2T8A6NH00 312 aa19.52■□□□□ 0.72
RAB40C-204ENST00000538492 Q8N976 141 aa19.52■□□□□ 0.72
RAB40C-204ENST00000538492 ZC2HC1AQ96GY0 325 aa19.52■□□□□ 0.72
RAB40C-204ENST00000538492 VAMP8Q9BV40 100 aa19.52■□□□□ 0.72
RAB40C-204ENST00000538492 RNF24Q9Y225 148 aa19.52■□□□□ 0.72
RAB40C-204ENST00000538492 CACNA1BQ00975 2339 aa19.52■□□□□ 0.72
RAB40C-204ENST00000538492 OOSP1A8MZH6 123 aa19.52■□□□□ 0.72
RAB40C-204ENST00000538492 RBPMS2Q6ZRY4 209 aaKnown RBP19.52■□□□□ 0.72
RAB40C-204ENST00000538492 EBI3Q14213 229 aa19.51■□□□□ 0.71
RAB40C-204ENST00000538492 IGHV7-81A0A0B4J1V7 117 aa19.51■□□□□ 0.71
RAB40C-204ENST00000538492 ZNF785A8K8V0 405 aa19.51■□□□□ 0.71
RAB40C-204ENST00000538492 NPIPB6E9PJ23 425 aa19.51■□□□□ 0.71
RAB40C-204ENST00000538492 EGR2P11161 476 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-204ENST00000538492 FOXA3P55318 350 aaPredicted RBP19.5■□□□□ 0.71
RAB40C-204ENST00000538492 C3orf79P0CE67 100 aa19.5■□□□□ 0.71
RAB40C-204ENST00000538492 EFNA4P52798 201 aa19.5■□□□□ 0.71
RAB40C-204ENST00000538492 RNASEKQ6P5S7 137 aaKnown RBP19.5■□□□□ 0.71
RAB40C-204ENST00000538492 TMEM75Q8N9X5 138 aa19.5■□□□□ 0.71
RAB40C-204ENST00000538492 BPESC1Q9GZL8 116 aa19.5■□□□□ 0.71
RAB40C-204ENST00000538492 GFRA4Q9GZZ7 299 aa19.5■□□□□ 0.71
RAB40C-204ENST00000538492 THYN1Q9P016 225 aa19.5■□□□□ 0.71
RAB40C-204ENST00000538492 IGHV2-70DA0A0C4DH43 119 aa19.49■□□□□ 0.71
RAB40C-204ENST00000538492 C19orf84I3L1E1 186 aa19.49■□□□□ 0.71
RAB40C-204ENST00000538492 HSBP1O75506 76 aa19.49■□□□□ 0.71
RAB40C-204ENST00000538492 KLF5Q13887 457 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-204ENST00000538492 Q8N9W7 124 aa19.49■□□□□ 0.71
RAB40C-204ENST00000538492 C2orf88Q9BSF0 95 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms