RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 A0A0D9SG52 128 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 ZNF98A6NK75 572 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 RGS13O14921 159 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 IFNA1P01562 189 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 MAS1LP35410 378 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 OR52E5Q8NH55 327 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 GATAD1Q8WUU5 269 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 IL22RA2Q969J5 263 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 TMEM14BQ9NUH8 114 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 TECRQ9NZ01 308 aaKnown RBP5.59□□□□□ -1.51
MSH6-209ENST00000538136 TRGV2A0A075B6R0 118 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 A0A1B0GUS0 222 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 CRYBB3P26998 211 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 ID3Q02535 119 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 ERCC8Q13216 396 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 GNPNAT1Q96EK6 184 aaPredicted RBP5.59□□□□□ -1.51
MSH6-209ENST00000538136 FANCD2OSQ96PS1 177 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 NPCDR1Q9BY65 106 aa5.59□□□□□ -1.51
MSH6-209ENST00000538136 S100A7P31151 101 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 RNF5Q99942 180 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 OR51M1Q9H341 326 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 RETNQ9HD89 108 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 KLK9Q9UKQ9 250 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 TRAV30A0A087WSZ9 112 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 LY6LH3BQJ8 138 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 NDUFA5Q16718 116 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 Q6ZNX1 250 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 SLC7A5P1Q8MH63 180 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 LINC00479Q96M42 142 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 KCNIP2Q9NS61 270 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 SLC45A2Q9UMX9 530 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 TENM3Q9P273 2699 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 K7EIM0 57 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 CXCL2P19875 107 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 NUTF2P61970 127 aaKnown RBP5.58□□□□□ -1.52
MSH6-209ENST00000538136 SMIM8Q96KF7 97 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 PFDN5Q99471 154 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 SMAD5-AS1Q9Y6J3 95 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 TRBV7-1A0A0A6YYK4 115 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 HELTA6NFD8 242 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 CBY3A6NI87 242 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 TEX22C9J3V5 150 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 CTSGP08311 255 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 DLK1P80370 383 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 FOXE3Q13461 319 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 TMEM144Q7Z5S9 345 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 ZNF491Q8N8L2 437 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 RNF126Q9BV68 326 aa5.58□□□□□ -1.52
MSH6-209ENST00000538136 PGPEP1LA6NFU8 196 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 F8W036 122 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 CAMPP49913 170 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 SELENOTP62341 195 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 BLOC1S1P78537 153 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 SLC51BQ86UW2 128 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 SPATA3Q8NHX4 192 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 TMA7Q9Y2S6 64 aaKnown RBP5.57□□□□□ -1.52
MSH6-209ENST00000538136 CR1P17927 2039 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 A0A1B0GW64 132 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 ZNF727A8MUV8 499 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 M0R381 172 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 C8orf88P0DMB2 117 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 ADMP35318 185 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 RNASEH2CQ8TDP1 164 aaKnown RBP5.57□□□□□ -1.52
MSH6-209ENST00000538136 A0A087X0M5 115 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 A0A1B0GX30 115 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 C2orf70A6NJV1 201 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 NPIPB5A8MRT5 1133 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 LGALSLQ3ZCW2 172 aaPredicted RBP5.57□□□□□ -1.52
MSH6-209ENST00000538136 FAM71F2Q6NXP2 309 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 SRD5A3Q9H8P0 318 aa5.57□□□□□ -1.52
MSH6-209ENST00000538136 IGKV1-17P01599 117 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 MGPP08493 103 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 CDX1P47902 265 aaPredicted RBP5.56□□□□□ -1.52
MSH6-209ENST00000538136 PROK1P58294 105 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 Q6ZS49 121 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 MGST2Q99735 147 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 SMIM7Q9BQ49 75 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 WDR61Q9GZS3 305 aaKnown RBP5.56□□□□□ -1.52
MSH6-209ENST00000538136 WFDC1Q9HC57 220 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 FAM223BA6NKX1 122 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 C11orf94C9JXX5 98 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 C1QBP02746 253 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 CNN1P51911 297 aaKnown RBP5.56□□□□□ -1.52
MSH6-209ENST00000538136 ZNF429Q86V71 674 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 FAM223AQ8IWN6 122 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 CCDC28AQ8IWP9 274 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 CCDC140Q96MF4 163 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 NDUFB4O95168 129 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 BRI3O95415 125 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 CFDP00746 253 aaPredicted RBP5.56□□□□□ -1.52
MSH6-209ENST00000538136 IGHG4P01861 327 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 SOHLH1Q5JUK2 328 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 LCN12Q6JVE5 192 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 NPBQ8NG41 125 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 OR4D5Q8NGN0 318 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 GGTLC1Q9BX51 225 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 NCOR1P1Q9H4R4 102 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 CACFD1Q9UGQ2 172 aa5.56□□□□□ -1.52
MSH6-209ENST00000538136 IGHV3-16A0A0C4DH30 117 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 IGLC1P0CG04 106 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms