RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 TEX50A0A1B0GTY4 177 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 A0A1B0GX78 115 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 CGB1A6NKQ9 187 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 CCL7P80098 99 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 ITLN1Q8WWA0 313 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 PRELID3AQ96N28 172 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 MBD3L4A6NDZ8 208 aaPredicted RBP8.59□□□□□ -1.03
RTN3-208ENST00000537981 MBD3L3A6NE82 208 aaPredicted RBP8.59□□□□□ -1.03
RTN3-208ENST00000537981 MOSP00540 346 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 SP1P08047 785 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 CYB561P49447 251 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 CFHR1Q03591 330 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 RPL39P5Q59GN2 51 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 C3orf56Q8N813 242 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 HARBI1Q96MB7 349 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 CYSLTR1Q9Y271 337 aa8.59□□□□□ -1.03
RTN3-208ENST00000537981 A0A087WWL8 130 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 TACC2O95359 2948 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 DUTP33316 252 aaKnown RBP8.58□□□□□ -1.04
RTN3-208ENST00000537981 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.58□□□□□ -1.04
RTN3-208ENST00000537981 SLC25A33Q9BSK2 321 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 RPP21Q9H633 154 aaKnown RBP8.58□□□□□ -1.04
RTN3-208ENST00000537981 RALYQ9UKM9 306 aaKnown RBP8.58□□□□□ -1.04
RTN3-208ENST00000537981 NPIPB5A8MRT5 1133 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 WNT9BO14905 357 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 PRTN3P24158 256 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 Q6AWC8 147 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 AJUBAQ96IF1 538 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 CHCHD2Q9Y6H1 151 aaPredicted RBP8.58□□□□□ -1.04
RTN3-208ENST00000537981 DNAJC13O75165 2243 aa8.58□□□□□ -1.04
RTN3-208ENST00000537981 IGLV3-32A0A0A0MS00 114 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 TRAV8-1A0A0A6YYK1 113 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 SPTY2D1-AS1A0A0U1RR47 76 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 ARMS2P0C7Q2 107 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 CD69Q07108 199 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 SRSF6Q13247 344 aaKnown RBP8.57□□□□□ -1.04
RTN3-208ENST00000537981 ABHD17BQ5VST6 288 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 PRSS3P2Q8NHM4 247 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 ZZEF1O43149 2961 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 IGHV4-34P06331 123 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 DEFB133Q30KQ1 61 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 FAM162BQ5T6X4 162 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 AAED1Q7RTV5 226 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 DEFB119Q8N690 84 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 CARD19Q96LW7 228 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 METRNQ9UJH8 293 aa8.57□□□□□ -1.04
RTN3-208ENST00000537981 TRBV25-1A0A075B6N4 114 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 CCL3P10147 92 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 EDN2P20800 178 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 SIGLEC8Q9NYZ4 499 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 C8orf88P0DMB2 117 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 CSN1S1P47710 185 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 KLRD1Q13241 179 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 OR1C1Q15619 314 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 PRSS22Q9GZN4 317 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 PPDPFQ9H3Y8 114 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 PEMTQ9UBM1 199 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 CACNA1HO95180 2353 aa8.56□□□□□ -1.04
RTN3-208ENST00000537981 TMSB15BA0A087X1C1 80 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 MOB1BQ7L9L4 216 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 CEND1Q8N111 149 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 CIARTQ8N365 385 aaPredicted RBP8.55□□□□□ -1.04
RTN3-208ENST00000537981 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 OR13A1Q8NGR1 328 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 LEAP2Q969E1 77 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 COQ2Q96H96 371 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 WI2-2373I1.2A0A1W2PRP0 233 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 CXCL13O43927 109 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 P01737 135 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 LGALS9BQ3B8N2 356 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 LGALS9CQ6DKI2 356 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 ZNF826PQ6ZT77 177 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 GTSCR1Q86UQ5 136 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 ZNF414Q96IQ9 312 aa8.55□□□□□ -1.04
RTN3-208ENST00000537981 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
RTN3-208ENST00000537981 SMKR1H3BMG3 65 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 C12orf74Q32Q52 190 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 LINC00596Q86U02 117 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 OR10X1Q8NGY0 326 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 ZNF502Q8TBZ5 544 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 MLST8Q9BVC4 326 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 MUC6Q6W4X9 2439 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 C19orf71A6NCJ1 209 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 GNG3P63215 75 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 PATE2Q6UY27 113 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 Q8NA96 180 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 AHCTF1Q8WYP5 2266 aa8.54□□□□□ -1.04
RTN3-208ENST00000537981 A0A0U1RRA0 63 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 ZNF134P52741 427 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 HHLA3Q9XRX5 114 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 RELNP78509 3460 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 D6R8Y8 96 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 DUX1O43812 170 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 SLC25A5P05141 298 aaKnown RBP8.53□□□□□ -1.04
RTN3-208ENST00000537981 FCER1GP30273 86 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 RUSC1-AS1Q66K80 236 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 FXYD5Q96DB9 178 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 DUX5Q96PT3 197 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 PAXXQ9BUH6 204 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms