RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 ZNF586Q9NXT0 402 aa13.67□□□□□ -0.22
SNX17-210ENST00000537606 IGHV3OR16-8A0A075B7F1 116 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 ZNF705GA8MUZ8 300 aaPredicted RBP13.66□□□□□ -0.22
SNX17-210ENST00000537606 MSMBP08118 114 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 PIFOQ8TCI5 191 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 C17orf77Q96MU5 243 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 THYN1Q9P016 225 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 LINC00527Q9UJ94 153 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 SNURFLB1AK76 121 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 MAPK1IP1LQ8NDC0 245 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 Q9H3A6 140 aa13.66□□□□□ -0.22
SNX17-210ENST00000537606 LY6EQ16553 131 aa13.65□□□□□ -0.22
SNX17-210ENST00000537606 MRPL54Q6P161 138 aaKnown RBP13.65□□□□□ -0.22
SNX17-210ENST00000537606 EXOC3-AS1Q8N2X6 119 aa13.65□□□□□ -0.22
SNX17-210ENST00000537606 C5orf56Q8N8D9 126 aa13.65□□□□□ -0.22
SNX17-210ENST00000537606 MS4A10Q96PG2 267 aa13.65□□□□□ -0.22
SNX17-210ENST00000537606 HIF1ANQ9NWT6 349 aa13.65□□□□□ -0.22
SNX17-210ENST00000537606 AVPP01185 164 aa13.65□□□□□ -0.22
SNX17-210ENST00000537606 SHANK2-AS3Q9BTD1 123 aa13.65□□□□□ -0.22
SNX17-210ENST00000537606 CHRDL1Q9BU40 450 aa13.65□□□□□ -0.22
SNX17-210ENST00000537606 C15orf32Q32M92 178 aa13.64□□□□□ -0.23
SNX17-210ENST00000537606 TRAV30A0A087WSZ9 112 aa13.64□□□□□ -0.23
SNX17-210ENST00000537606 WI2-2373I1.2A0A1W2PRP0 233 aa13.64□□□□□ -0.23
SNX17-210ENST00000537606 KRTAP10-9P60411 292 aa13.64□□□□□ -0.23
SNX17-210ENST00000537606 UBE2G1P62253 170 aa13.64□□□□□ -0.23
SNX17-210ENST00000537606 Q71RC1 249 aaPredicted RBP13.64□□□□□ -0.23
SNX17-210ENST00000537606 PRDM13Q9H4Q3 707 aa13.64□□□□□ -0.23
SNX17-210ENST00000537606 TRAV9-1A0A075B6T8 112 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 F2Z2F3 143 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 H3BRN7 92 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 AMY1AP04745 511 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 CTSGP08311 255 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 KIAA1644Q3SXP7 199 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 C9orf152Q5JTZ5 239 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 NUDT10Q8NFP7 164 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 FAM110DQ8TAY7 271 aaPredicted RBP13.63□□□□□ -0.23
SNX17-210ENST00000537606 NUDT11Q96G61 164 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 ZMAT5Q9UDW3 170 aaKnown RBP13.63□□□□□ -0.23
SNX17-210ENST00000537606 TP53TG3Q9ULZ0 132 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 TRAV8-1A0A0A6YYK1 113 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 HIST1H1EP10412 219 aaKnown RBP13.63□□□□□ -0.23
SNX17-210ENST00000537606 RHOGP84095 191 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 TMEM183BQ1AE95 376 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 GBGT1Q8N5D6 347 aa13.63□□□□□ -0.23
SNX17-210ENST00000537606 GPR183P32249 361 aa13.62□□□□□ -0.23
SNX17-210ENST00000537606 RAB4BP61018 213 aa13.62□□□□□ -0.23
SNX17-210ENST00000537606 SMIM27A0A1W2PRY6 76 aa13.62□□□□□ -0.23
SNX17-210ENST00000537606 GZMBP10144 247 aa13.62□□□□□ -0.23
SNX17-210ENST00000537606 LINC00322Q6ZN03 302 aaPredicted RBP13.62□□□□□ -0.23
SNX17-210ENST00000537606 BPIFA4PQ86YQ2 179 aa13.62□□□□□ -0.23
SNX17-210ENST00000537606 TMEM68Q96MH6 324 aa13.62□□□□□ -0.23
SNX17-210ENST00000537606 TMEM14CQ9P0S9 112 aa13.62□□□□□ -0.23
SNX17-210ENST00000537606 NAT8BQ9UHF3 227 aa13.62□□□□□ -0.23
SNX17-210ENST00000537606 B4DSR2 109 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 PRR31Q5SQ13 230 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 ASCL2Q99929 193 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 MOB4Q9Y3A3 225 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 GATCO43716 136 aaKnown RBP13.61□□□□□ -0.23
SNX17-210ENST00000537606 TCRAP04437 139 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 CLEC3BP05452 202 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 LINC00310P59036 64 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 TMEM136Q6ZRR5 245 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 C5orf17Q8NAS9 161 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 ZNF48Q96MX3 618 aaPredicted RBP13.61□□□□□ -0.23
SNX17-210ENST00000537606 ATG101Q9BSB4 218 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 NBPF19A0A087WUL8 3843 aa13.61□□□□□ -0.23
SNX17-210ENST00000537606 NAV2Q8IVL1 2488 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 H3BUX3 64 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 CTAG1AP78358 180 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 JOSD1Q15040 202 aaPredicted RBP13.6□□□□□ -0.23
SNX17-210ENST00000537606 OR4F17Q8NGA8 305 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 TMEM18Q96B42 140 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 MEGF9Q9H1U4 602 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 KLF12Q9Y4X4 402 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 CRISP2P16562 243 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 MBD6Q96DN6 1003 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 GNB1LQ9BYB4 327 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 PRO1933Q9H354 126 aa13.6□□□□□ -0.23
SNX17-210ENST00000537606 TRBV19A0A075B6N1 114 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 TRAV20A0A0B4J274 112 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 IGLC2P0DOY2 106 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 GPR82Q96P67 336 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 GNB4Q9HAV0 340 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 CHD6Q8TD26 2715 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 CD33P20138 364 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 CLEC19AQ6UXS0 136 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 GOLT1AQ6ZVE7 132 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 ZNF502Q8TBZ5 544 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 OTORQ9NRC9 128 aa13.59□□□□□ -0.23
SNX17-210ENST00000537606 MRPS12O15235 138 aaKnown RBP13.58□□□□□ -0.24
SNX17-210ENST00000537606 SERF1AO75920 110 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 FAM231DQ6ZW35 169 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 CMTM2Q8TAZ6 248 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 MLST8Q9BVC4 326 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 TRBV9A0A0B4J1U6 114 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 DSCR9P59020 149 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 NUP35Q8NFH5 326 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 VN1R17PQ8TDU5 208 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 ZNF414Q96IQ9 312 aa13.58□□□□□ -0.24
SNX17-210ENST00000537606 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms