RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 TMEM208Q9BTX3 173 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 RSG1Q9BU20 258 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 SLC35B3Q9H1N7 401 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 C9orf170A2RU37 121 aa9.4□□□□□ -0.9
RTN3-207ENST00000536011 NDUFB6O95139 128 aa9.4□□□□□ -0.9
RTN3-207ENST00000536011 DUSP14O95147 198 aaKnown RBP9.4□□□□□ -0.9
RTN3-207ENST00000536011 IL5P05113 134 aa9.4□□□□□ -0.9
RTN3-207ENST00000536011 DEFB1P60022 68 aa9.4□□□□□ -0.9
RTN3-207ENST00000536011 RRN3P1Q2M238 152 aa9.4□□□□□ -0.9
RTN3-207ENST00000536011 TMEM144Q7Z5S9 345 aa9.4□□□□□ -0.9
RTN3-207ENST00000536011 POM121L12Q8N7R1 296 aa9.4□□□□□ -0.9
RTN3-207ENST00000536011 NIPSNAP3BQ9BS92 247 aa9.4□□□□□ -0.9
RTN3-207ENST00000536011 LOC102723971A0A1B0GUV8 181 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 F6UB75 175 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 SSSCA1O60232 199 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 RPL7P18124 248 aaKnown RBP9.39□□□□□ -0.91
RTN3-207ENST00000536011 ID3Q02535 119 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 OXA1LQ15070 435 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 PSENENQ9NZ42 101 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 DKK2Q9UBU2 259 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
RTN3-207ENST00000536011 A8MTW9 85 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 FNDC10F2Z333 226 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 HYPMO75409 117 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 ADAP1O75689 374 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 INSP01308 110 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 OR4E1P0C645 316 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
RTN3-207ENST00000536011 B2MP61769 119 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 POLR2GP62487 172 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTN3-207ENST00000536011 CNPY1Q3B7I2 92 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 C4orf46Q504U0 113 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 FAM222AQ5U5X8 452 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 MGAT4CQ9UBM8 478 aa9.38□□□□□ -0.91
RTN3-207ENST00000536011 H3BRN7 92 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 LINC00869P0C866 280 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 DLK1P80370 383 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 FGL1Q08830 312 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 C1orf158Q8N1D5 194 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 ZNF738Q8NE65 137 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 OR10P1Q8NGE3 313 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
RTN3-207ENST00000536011 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
RTN3-207ENST00000536011 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
RTN3-207ENST00000536011 YTHDF2Q9Y5A9 579 aaKnown RBP9.37□□□□□ -0.91
RTN3-207ENST00000536011 OR5G3P0C626 314 aa9.36□□□□□ -0.91
RTN3-207ENST00000536011 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
RTN3-207ENST00000536011 TAS2R30P59541 319 aa9.36□□□□□ -0.91
RTN3-207ENST00000536011 PLP1P60201 277 aa9.36□□□□□ -0.91
RTN3-207ENST00000536011 DAD1P61803 113 aa9.36□□□□□ -0.91
RTN3-207ENST00000536011 IAH1Q2TAA2 248 aaPredicted RBP9.36□□□□□ -0.91
RTN3-207ENST00000536011 PXDC1Q5TGL8 231 aa9.36□□□□□ -0.91
RTN3-207ENST00000536011 LRRC20Q8TCA0 184 aa9.36□□□□□ -0.91
RTN3-207ENST00000536011 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
RTN3-207ENST00000536011 K7EPK0 472 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 TSC22D2O75157 780 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 SCGB1D2O95969 90 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 METTL15P1P0C7V9 234 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 HTN3P15516 51 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 BAK1Q16611 211 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 TMEM14EPQ6UXP3 125 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
RTN3-207ENST00000536011 ZNF546Q86UE3 836 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 OR11H7Q8NGC8 314 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 HERC2O95714 4834 aa9.35□□□□□ -0.91
RTN3-207ENST00000536011 A0A087X0K7 114 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 LINC00854A0A1B0GVQ3 168 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 LYRM9A8MSI8 78 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 BOLA2-SMG1P6H3BVE0 249 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 CXCL2P19875 107 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 ANXA7P20073 488 aaKnown RBP9.34□□□□□ -0.91
RTN3-207ENST00000536011 TSPOP30536 169 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 RRAS2P62070 204 aaPredicted RBP9.34□□□□□ -0.91
RTN3-207ENST00000536011 ZNF846Q147U1 533 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 RNF212Q495C1 297 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 RNF182Q8N6D2 247 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 GSKIPQ9P0R6 139 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
RTN3-207ENST00000536011 TRAV8-2A0A0B4J237 113 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 PMS2P5A8MQ11 134 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 M0R2Z0 102 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 GOSR2O14653 212 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 RHOBP62745 196 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
RTN3-207ENST00000536011 SOHLH1Q5JUK2 328 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms