RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 C22orf46C9J442 243 aa14.39□□□□□ -0.11
RAB40C-203ENST00000535977 SIGMAR1Q99720 223 aa14.39□□□□□ -0.11
RAB40C-203ENST00000535977 GGTLC3B5MD39 225 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 B9A039 149 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 COX8AP10176 69 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 SCGB2A2Q13296 93 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 ZNF503Q96F45 646 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 ACACBO00763 2458 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 E7EQL1 145 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 IGLV2-23P01705 113 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 SMIM17P0DL12 118 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 FOXA3P55318 350 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-203ENST00000535977 MBD6Q96DN6 1003 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 VKORC1Q9BQB6 163 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 CTSZQ9UBR2 303 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 BOD1L1Q8NFC6 3051 aa14.38□□□□□ -0.11
RAB40C-203ENST00000535977 A0A0G2JLM5 398 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 IGHV1-8P0DP01 117 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 CD24P25063 80 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 TNCP24821 2201 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 PSMB11A5LHX3 300 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 FSTL3O95633 263 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 PSG3Q16557 428 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 MLANAQ16655 118 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 TEX45Q8NA69 505 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 THAP8Q8NA92 274 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 PERPQ96FX8 193 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 HILPDAQ9Y5L2 63 aa14.37□□□□□ -0.11
RAB40C-203ENST00000535977 RPL24P83731 157 aaKnown RBP14.36□□□□□ -0.11
RAB40C-203ENST00000535977 ZGRF1Q86YA3 2104 aa14.36□□□□□ -0.11
RAB40C-203ENST00000535977 MAP1LC3CQ9BXW4 147 aa14.36□□□□□ -0.11
RAB40C-203ENST00000535977 TMEM133Q9H2Q1 129 aa14.36□□□□□ -0.11
RAB40C-203ENST00000535977 TEX48A0A1B0GUV7 120 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 TCRBV4S1A1TA0A5B7 111 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 CD3EP07766 207 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 RAB9AP51151 201 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 WT1-ASQ06250 92 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 LINC00479Q96M42 142 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 SPCS1Q9Y6A9 102 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 A6NDN8 102 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 K7ENP7 123 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 COX7A2P2O60397 106 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 KIR3DS1Q14943 382 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 FAM162BQ5T6X4 162 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 RAB37Q96AX2 223 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
RAB40C-203ENST00000535977 CGB1A6NKQ9 187 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 VWC2LB2RUY7 222 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 HSD52Q0P140 79 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 C10orf113Q5VZT2 155 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 GRAMD2BQ96HH9 432 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 FAM167A-AS1Q96KT0 104 aa14.35□□□□□ -0.11
RAB40C-203ENST00000535977 OR5A1Q8NGJ0 315 aa14.34□□□□□ -0.11
RAB40C-203ENST00000535977 SLC25A2Q9BXI2 301 aa14.34□□□□□ -0.11
RAB40C-203ENST00000535977 RALYQ9UKM9 306 aaKnown RBP14.34□□□□□ -0.11
RAB40C-203ENST00000535977 ATMQ13315 3056 aa14.34□□□□□ -0.11
RAB40C-203ENST00000535977 HIGD1CA8MV81 97 aa14.34□□□□□ -0.11
RAB40C-203ENST00000535977 E7EUB6 86 aa14.34□□□□□ -0.11
RAB40C-203ENST00000535977 PVRIGQ6DKI7 326 aa14.34□□□□□ -0.11
RAB40C-203ENST00000535977 STXBP6Q8NFX7 210 aa14.34□□□□□ -0.11
RAB40C-203ENST00000535977 NPIPB3Q92617 1050 aa14.34□□□□□ -0.11
RAB40C-203ENST00000535977 CEACAM3P40198 252 aa14.33□□□□□ -0.12
RAB40C-203ENST00000535977 UBE2L3P68036 154 aaKnown RBP14.33□□□□□ -0.12
RAB40C-203ENST00000535977 DIAPH2-AS1Q14236 149 aa14.33□□□□□ -0.12
RAB40C-203ENST00000535977 SLC25A17O43808 307 aa14.33□□□□□ -0.12
RAB40C-203ENST00000535977 RBP4P02753 201 aa14.33□□□□□ -0.12
RAB40C-203ENST00000535977 RABAC1Q9UI14 185 aa14.33□□□□□ -0.12
RAB40C-203ENST00000535977 TRAV26-1A0A087WT03 109 aa14.32□□□□□ -0.12
RAB40C-203ENST00000535977 A0A1W2PPM0 123 aa14.32□□□□□ -0.12
RAB40C-203ENST00000535977 PAXXQ9BUH6 204 aa14.32□□□□□ -0.12
RAB40C-203ENST00000535977 TIMM8BQ9Y5J9 83 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-203ENST00000535977 RP1L1Q8IWN7 2480 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-203ENST00000535977 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.32□□□□□ -0.12
RAB40C-203ENST00000535977 A0A1B0GXF2 115 aa14.32□□□□□ -0.12
RAB40C-203ENST00000535977 LIPFP07098 398 aa14.32□□□□□ -0.12
RAB40C-203ENST00000535977 ENSAO43768 121 aaKnown RBP14.31□□□□□ -0.12
RAB40C-203ENST00000535977 ZNF138P52744 262 aa14.31□□□□□ -0.12
RAB40C-203ENST00000535977 TSSC4Q9Y5U2 329 aaPredicted RBP14.31□□□□□ -0.12
RAB40C-203ENST00000535977 CRYGCP07315 174 aa14.31□□□□□ -0.12
RAB40C-203ENST00000535977 FGF6P10767 208 aa14.31□□□□□ -0.12
RAB40C-203ENST00000535977 CKS1BP61024 79 aa14.31□□□□□ -0.12
RAB40C-203ENST00000535977 LINC01545Q5VT33 79 aa14.31□□□□□ -0.12
RAB40C-203ENST00000535977 FAM231DQ6ZW35 169 aa14.31□□□□□ -0.12
RAB40C-203ENST00000535977 A0A1W2PPI3 338 aa14.3□□□□□ -0.12
RAB40C-203ENST00000535977 TRGV9Q99603 122 aa14.3□□□□□ -0.12
RAB40C-203ENST00000535977 IGKV1D-37A0A075B6S9 117 aa14.3□□□□□ -0.12
RAB40C-203ENST00000535977 CRYBA4P53673 196 aa14.3□□□□□ -0.12
RAB40C-203ENST00000535977 C10orf55Q5SWW7 151 aa14.3□□□□□ -0.12
RAB40C-203ENST00000535977 RNF5Q99942 180 aa14.3□□□□□ -0.12
RAB40C-203ENST00000535977 MAP1BP46821 2468 aaKnown RBP14.3□□□□□ -0.12
RAB40C-203ENST00000535977 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-203ENST00000535977 GAGE12HA6NDE8 117 aa14.29□□□□□ -0.12
RAB40C-203ENST00000535977 OR5AL1P0C617 328 aa14.29□□□□□ -0.12
RAB40C-203ENST00000535977 RPL27AP46776 148 aaKnown RBP14.29□□□□□ -0.12
RAB40C-203ENST00000535977 FBXL19-AS1Q494R0 122 aa14.29□□□□□ -0.12
RAB40C-203ENST00000535977 AMMECR1Q9Y4X0 333 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-203ENST00000535977 IGLV1-47P01700 117 aa14.29□□□□□ -0.12
RAB40C-203ENST00000535977 CRYGBP07316 175 aa14.29□□□□□ -0.12
RAB40C-203ENST00000535977 MRGPRG-AS1Q2M3A8 158 aa14.29□□□□□ -0.12
RAB40C-203ENST00000535977 CCDC144NLQ6NUI1 221 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms