RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GALR1P47211 349 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 TAS2R30P59541 319 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 EWSR1Q01844 656 aaKnown RBP eCLIP6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 TNXAQ16473 311 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 TMEM41BQ5BJD5 291 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 ACSM6Q6P461 480 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 LGI3Q8N145 548 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 ZNF645Q8N7E2 425 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 OR4C5Q8NGB2 326 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 DDB2Q92466 427 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 RPUSD4Q96CM3 377 aaKnown RBP6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 WWC2-AS2Q96NR7 200 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 OR4C12Q96R67 309 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 PSMG3Q9BT73 122 aaPredicted RBP6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 SH3BGRL3Q9H299 93 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 LAMTOR2Q9Y2Q5 125 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 LSM5Q9Y4Y9 91 aaKnown RBP6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 U3KQK5 164 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 A0A0G2JLM5 398 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 MPPED1O15442 326 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 FCGR3BO75015 233 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 TUSC2O75896 110 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 KBTBD11O94819 623 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 GP9P14770 177 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 CTRLP40313 264 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 UCP3P55916 312 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 TMEM187Q14656 261 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 BSXQ3C1V8 233 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 OCIAD2Q56VL3 154 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 HAPLN4Q86UW8 402 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 CMTM1Q8IZ96 169 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 OR2C3Q8N628 320 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 TEX45Q8NA69 505 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 OSR1Q8TAX0 266 aaPredicted RBP6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 VPS25Q9BRG1 176 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 ELOVL1Q9BW60 279 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 NAA60Q9H7X0 242 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 RPH3ALQ9UNE2 315 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 OR2W1Q9Y3N9 320 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 PXMP4Q9Y6I8 212 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 SMAD5-AS1Q9Y6J3 95 aa6.56□□□□□ -1.36
SFSWAP-202ENST00000535202 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 IGKV1D-13A0A0B4J2D9 117 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 SAA1P0DJI8 122 aaPredicted RBP6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 IGKV1-13P0DP09 117 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 GNRHRP30968 328 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 YPEL3P61236 119 aaPredicted RBP6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 RPL30P62888 115 aaKnown RBP6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 SERF2P84101 59 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 Q0VG73 95 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 MRGPRG-AS1Q2M3A8 158 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 CMTM2Q8TAZ6 248 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 SRSF12Q8WXF0 261 aaKnown RBP6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 PINX1Q96BK5 328 aaKnown RBP6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 EHFQ9NZC4 300 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 ANXA10Q9UJ72 324 aa6.55□□□□□ -1.36
SFSWAP-202ENST00000535202 SORL1Q92673 2214 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 CBY3A6NI87 242 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 ACTL6BO94805 426 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 IGLV2-14P01704 120 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 TRBV12-3P01733 135 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 OR9G9P0C7N8 305 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 AADACP22760 399 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 HNRNPA3P51991 378 aaKnown RBP6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 C10orf55Q5SWW7 151 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 CFAP161Q6P656 301 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 TMEM144Q7Z5S9 345 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 MMD2Q8IY49 270 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 STPG4Q8N801 248 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 CCDC71LQ8N9Z2 235 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 GPR146Q96CH1 333 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 ATP5SQ99766 215 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 CST9LQ9H4G1 147 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 ZNF430Q9H8G1 570 aaPredicted RBP6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 ZNF586Q9NXT0 402 aa6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 PEF1Q9UBV8 284 aaKnown RBP6.54□□□□□ -1.36
SFSWAP-202ENST00000535202 TRBV9A0A0B4J1U6 114 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 TNFSF12O43508 249 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 RBMXL2O75526 392 aaKnown RBP6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 BRI3O95415 125 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 IGLC2P0DOY2 106 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 SYNJ2BPP57105 145 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 SUMO1P63165 101 aaKnown RBP6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 RPEL1Q2QD12 228 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 COX19Q49B96 90 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 Q6ZWC4 215 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 SBSPONQ8IVN8 264 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 VKORC1L1Q8N0U8 176 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 OR9G4Q8NGQ1 327 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 OR1L6Q8NGR2 347 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 OR4S2Q8NH73 311 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 TMEM37Q8WXS4 190 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 USMG5Q96IX5 58 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 GPHA2Q96T91 129 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 HSD17B10Q99714 261 aaKnown RBP6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 SMIM7Q9BQ49 75 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 MANBALQ9NQG1 85 aa6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 RCL1Q9Y2P8 373 aaKnown RBP6.53□□□□□ -1.36
SFSWAP-202ENST00000535202 TNCP24821 2201 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms