RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.43□□□□□ -0.74
BEST1-208ENST00000534553 ZNF253O75346 499 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 CLEC3BP05452 202 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 IGHV4-31P0DP07 118 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 HNF1AP20823 631 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 PSG9Q00887 426 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 RPEL1Q2QD12 228 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 C9orf152Q5JTZ5 239 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 FAM209BQ5JX69 171 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 AAMDCQ9H7C9 122 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 V9GYV3 84 aa10.43□□□□□ -0.74
BEST1-208ENST00000534553 SVEP1Q4LDE5 3571 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 LINC01548A6NM66 108 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 FSHBP01225 129 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 IGHV3-23P01764 117 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 MGST1P10620 155 aaKnown RBP10.42□□□□□ -0.74
BEST1-208ENST00000534553 COL8A1P27658 744 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 KRTAP10-9P60411 292 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
BEST1-208ENST00000534553 LY6EQ16553 131 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 COX19Q49B96 90 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 ZNF414Q96IQ9 312 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 ABCA1O95477 2261 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
BEST1-208ENST00000534553 SH2D7A6NKC9 451 aaPredicted RBP10.42□□□□□ -0.74
BEST1-208ENST00000534553 TRGV3P03979 118 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 MEOX2P50222 304 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 C1orf194Q5T5A4 169 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
BEST1-208ENST00000534553 ZNF320A2RRD8 509 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 LTAP01374 205 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 PPIFP30405 207 aaKnown RBP10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BDP58876 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BCP62807 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 OR5I1Q13606 314 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST2H2BEQ16778 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.41□□□□□ -0.74
BEST1-208ENST00000534553 TOMM20LQ6UXN7 152 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 CLEC19AQ6UXS0 136 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 OR8I2Q8N0Y5 310 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BHQ93079 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BNQ99877 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
BEST1-208ENST00000534553 ANKRD17O75179 2603 aaKnown RBP10.41□□□□□ -0.74
BEST1-208ENST00000534553 A0A0G2JLM5 398 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 PHOX2AO14813 284 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 S100A8P05109 93 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 CSN1S1P47710 185 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 GNG5P63218 68 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 FABP9Q0Z7S8 132 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 ACTL10Q5JWF8 245 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 CYB5R2Q6BCY4 276 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 LINC00479Q96M42 142 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 MS4A10Q96PG2 267 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 MLST8Q9BVC4 326 aa10.4□□□□□ -0.74
BEST1-208ENST00000534553 TRGC1P0CF51 173 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 IER3P46695 156 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 DEFB112Q30KQ8 113 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 CT83Q5H943 113 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 FRZBQ92765 325 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 Q96MF0 132 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 METTL26Q96S19 204 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 RNASE7Q9H1E1 156 aaKnown RBP10.4□□□□□ -0.75
BEST1-208ENST00000534553 GNB4Q9HAV0 340 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 ZFP30Q9Y2G7 519 aa10.4□□□□□ -0.75
BEST1-208ENST00000534553 FBN2P35556 2912 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 CRYBG3Q68DQ2 2970 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 A0A087X0K7 114 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 TRAV34A0A0B4J273 112 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 TMEM89A2RUT3 159 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 ZNF705GA8MUZ8 300 aaPredicted RBP10.39□□□□□ -0.75
BEST1-208ENST00000534553 SNRPCP09234 159 aaKnown RBP10.39□□□□□ -0.75
BEST1-208ENST00000534553 TPPP2P59282 170 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 PSMG3-AS1Q96PY0 264 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 ZNF492Q9P255 531 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 RPH3ALQ9UNE2 315 aa10.39□□□□□ -0.75
BEST1-208ENST00000534553 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 H3BTX0 84 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 SLC17A3O00476 420 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 BUB3O43684 328 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 GATCO43716 136 aaKnown RBP10.38□□□□□ -0.75
BEST1-208ENST00000534553 MT-ND6P03923 174 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 AKR1D1P51857 326 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 Q86TA4 180 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 TMEM183AQ8IXX5 376 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 EXOC3-AS1Q8N2X6 119 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 GRAMD2BQ96HH9 432 aa10.38□□□□□ -0.75
BEST1-208ENST00000534553 USP9YO00507 2555 aaPredicted RBP10.38□□□□□ -0.75
BEST1-208ENST00000534553 IGLV1-40P01703 118 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 HOXA5P20719 270 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 WDR73Q6P4I2 378 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 RASL11AQ6T310 242 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms