RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 HOPXQ9BPY8 73 aaPredicted RBP3.19□□□□□ -1.9
CASP4-213ENST00000534356 TUBA4BQ9H853 241 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 EFCAB1Q9HAE3 211 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 RHBDL2Q9NX52 303 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 TVP23BQ9NYZ1 205 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 R4GMQ9 66 aa3.19□□□□□ -1.9
CASP4-213ENST00000534356 IGHV3-49A0A0A0MS15 119 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 IGHV3OR16-9A0A0B4J2B5 98 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 CENPXA8MT69 81 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 HSBP1L1C9JCN9 74 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 H0YJX3 145 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 C15orf65H3BRN8 121 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 MPZL2O60487 215 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 LGALS1P09382 135 aaKnown RBP3.18□□□□□ -1.9
CASP4-213ENST00000534356 CCL1P22362 96 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 CBX5P45973 191 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 NDUFA5Q16718 116 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 RGS21Q2M5E4 152 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 FAM222AQ5U5X8 452 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 LPCAT4Q643R3 524 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 RPL13AP3Q6NVV1 102 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 ARPINQ7Z6K5 226 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 CROCCP2Q86T23 111 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 ZNF439Q8NDP4 499 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 OR5T1Q8NG75 326 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 OR51T1Q8NGJ9 327 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 OR1L1Q8NH94 360 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 TEX47Q8TBZ9 253 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 BORCS8Q96FH0 119 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 MROQ9BYG7 248 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 YIPF3Q9GZM5 350 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 FBXL15Q9H469 300 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 TREM1Q9NP99 234 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 C8orf4Q9NR00 106 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 MCUBQ9NWR8 336 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 BAIAP2Q9UQB8 552 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 SAMHD1Q9Y3Z3 626 aaKnown RBP3.18□□□□□ -1.9
CASP4-213ENST00000534356 NUBP2Q9Y5Y2 271 aa3.18□□□□□ -1.9
CASP4-213ENST00000534356 FAT1Q14517 4588 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 LOC107986453A0A1B0GWG9 222 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 A0A1W2PQL4 384 aaPredicted RBP3.17□□□□□ -1.9
CASP4-213ENST00000534356 SDCBPO00560 298 aaPredicted RBP3.17□□□□□ -1.9
CASP4-213ENST00000534356 APOA1P02647 267 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 APELAP0DMC3 54 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 PFN2P35080 140 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 RBP2P50120 134 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 ACTBP60709 375 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 RAB14P61106 215 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 TSPAN5P62079 268 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 MMDQ15546 238 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 OR2T5Q6IEZ7 315 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 AKAP14Q86UN6 197 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 LYPD6Q86Y78 171 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 VKORC1L1Q8N0U8 176 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 YIPF7Q8N8F6 280 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 ZNF565Q8N9K5 539 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 OR2T29Q8NH02 315 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 HAVCR2Q8TDQ0 301 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 GHSRQ92847 366 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 ARL11Q969Q4 196 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 C18orf15Q96N68 181 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 RDH12Q96NR8 316 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 MAP1LC3CQ9BXW4 147 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 MRPL20Q9BYC9 149 aaKnown RBP3.17□□□□□ -1.9
CASP4-213ENST00000534356 CHST5Q9GZS9 411 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 LINC00574Q9H8X3 128 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 AP3M1Q9Y2T2 418 aa3.17□□□□□ -1.9
CASP4-213ENST00000534356 OR11H12B2RN74 326 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 ATP5HO75947 161 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 HLA-AP01891 365 aaKnown RBP3.16□□□□□ -1.9
CASP4-213ENST00000534356 PRH1P02810 166 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 MT-ND4P03905 459 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 TRGV3P03979 118 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 CSN2P05814 226 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 TPPP2P59282 170 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 CDC42P60953 191 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 C5orf64Q2M2E5 130 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 SPIN3Q5JUX0 258 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 UNQ5815/PRO19632Q6UWF5 114 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 LINC00311Q8N616 119 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 LINC00304Q8N9R0 145 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 LFNGQ8NES3 379 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 OR51A2Q8NGJ7 313 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 OR4K15Q8NH41 348 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 REEP1Q9H902 201 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 PLEKHA1Q9HB21 404 aa3.16□□□□□ -1.9
CASP4-213ENST00000534356 AMMECR1Q9Y4X0 333 aaPredicted RBP3.16□□□□□ -1.9
CASP4-213ENST00000534356 IGHV3OR16-8A0A075B7F1 116 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 RAB19A4D1S5 217 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 METTL15A6NJ78 407 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 ZNF98A6NK75 572 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 ZNF670-ZNF695F2Z2N8 137 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 TAAR5O14804 337 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 GEMIN2O14893 280 aaKnown RBP3.15□□□□□ -1.91
CASP4-213ENST00000534356 DEFB4AO15263 64 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 GATBO75879 557 aaKnown RBP3.15□□□□□ -1.91
CASP4-213ENST00000534356 S1PR2O95136 353 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 CNIH1O95406 144 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 CYB5AP00167 134 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 HLA-DRB1P01911 266 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms