RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 RNASE2P10153 161 aaKnown RBP4.26□□□□□ -1.73
CD44-237ENST00000534082 NUP62P37198 522 aaPredicted RBP4.26□□□□□ -1.73
CD44-237ENST00000534082 ETV6P41212 452 aa4.26□□□□□ -1.73
CD44-237ENST00000534082 HSPE1P61604 102 aaKnown RBP4.26□□□□□ -1.73
CD44-237ENST00000534082 C10orf126Q8N4M7 172 aa4.26□□□□□ -1.73
CD44-237ENST00000534082 OR6F1Q8NGZ6 308 aa4.26□□□□□ -1.73
CD44-237ENST00000534082 A0A0B4J293 547 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 A0A0U1RQV1 116 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 LOC100506127A0A0U1RQW1 187 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 SERTM2A0A1B0GWG4 89 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 METTL21EPA6NDL7 271 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 TMEM235A6NFC5 223 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 DUSP14O95147 198 aaKnown RBP4.25□□□□□ -1.73
CD44-237ENST00000534082 UCP1P25874 307 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 OR10J1P30954 320 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 RPL5P46777 297 aaKnown RBP4.25□□□□□ -1.73
CD44-237ENST00000534082 RND2P52198 227 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 GNG2P59768 71 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 YPEL3P61236 119 aaPredicted RBP4.25□□□□□ -1.73
CD44-237ENST00000534082 ASAH1Q13510 395 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 WFDC2Q14508 124 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 ACOT6Q3I5F7 207 aaPredicted RBP4.25□□□□□ -1.73
CD44-237ENST00000534082 CDNFQ49AH0 187 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 SAMD13Q5VXD3 122 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 LYPD5Q6UWN5 251 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 H2BFWTQ7Z2G1 175 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 LINC00518Q8N0U6 118 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 SLC35G3Q8N808 338 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 RBPMSQ93062 196 aaKnown RBP4.25□□□□□ -1.73
CD44-237ENST00000534082 BORCS5Q969J3 196 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 SLC25A39Q9BZJ4 359 aaPredicted RBP4.25□□□□□ -1.73
CD44-237ENST00000534082 ATG5Q9H1Y0 275 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 RCL1Q9Y2P8 373 aaKnown RBP4.25□□□□□ -1.73
CD44-237ENST00000534082 V9GY05 133 aa4.25□□□□□ -1.73
CD44-237ENST00000534082 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.24□□□□□ -1.73
CD44-237ENST00000534082 TRAV5A0A0B4J249 113 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 SNURFLB1AK76 121 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 INS-IGF2F8WCM5 200 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 PGLYRP1O75594 196 aaPredicted RBP4.24□□□□□ -1.73
CD44-237ENST00000534082 ARL6IP5O75915 188 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 TOMM40O96008 361 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 IGLV2-11P01706 119 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 FCER2P06734 321 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 ZNF182P17025 639 aaPredicted RBP4.24□□□□□ -1.73
CD44-237ENST00000534082 SUB1P53999 127 aaKnown RBP eCLIP4.24□□□□□ -1.73
CD44-237ENST00000534082 OR10A3P58181 314 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 HERV-K104P61576 105 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 RPS25P62851 125 aaKnown RBP4.24□□□□□ -1.73
CD44-237ENST00000534082 PRSS54Q6PEW0 395 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 Q6ZRU5 148 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 Q6ZTI0 123 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 NANOGP1Q8N7R0 232 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 BEST4Q8NFU0 473 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 OR51G1Q8NGK1 321 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 C16orf92Q96LL3 132 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 PBDC1Q9BVG4 233 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 Q9HAA7 133 aa4.24□□□□□ -1.73
CD44-237ENST00000534082 TRGV2A0A075B6R0 118 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 LECT2O14960 151 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 STAG3L3P0CL85 134 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 RD3LP0DJH9 198 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 PSG1P11464 419 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 PSMB9P28065 219 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 MEOX2P50222 304 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 SUPT4H1P63272 117 aaKnown RBP4.23□□□□□ -1.73
CD44-237ENST00000534082 GAMTQ14353 236 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 C1orf146Q5VVC0 180 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 OR8G2PQ6IF36 304 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 TMEM91Q6ZNR0 172 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 MRGPRFQ96AM1 343 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 SEC22AQ96IW7 307 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 CCDC90BQ9GZT6 254 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 TREM1Q9NP99 234 aa4.23□□□□□ -1.73
CD44-237ENST00000534082 PCP4L1A6NKN8 68 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 IFITM5A6NNB3 132 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 ANKRD65E5RJM6 399 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 H7BYZ3 331 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 IGKV1-39P01597 117 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 IGKV1D-39P04432 117 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 SLC25A4P12235 298 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 CAMLGP49069 296 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 GNGT1P63211 74 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 IZUMO4Q1ZYL8 232 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 BSXQ3C1V8 233 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 C1orf194Q5T5A4 169 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 AHSA2Q719I0 299 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 NEGR1Q7Z3B1 354 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 CCDC28AQ8IWP9 274 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 OR8I2Q8N0Y5 310 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 ZNF555Q8NEP9 628 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 OR52E5Q8NH55 327 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 PYDC1Q8WXC3 89 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 TMEM37Q8WXS4 190 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 ACY3Q96HD9 319 aa4.22□□□□□ -1.73
CD44-237ENST00000534082 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 ZNF324O75467 553 aaPredicted RBP4.21□□□□□ -1.74
CD44-237ENST00000534082 CCNKO75909 580 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 NXPH3O95157 252 aa4.21□□□□□ -1.74
CD44-237ENST00000534082 RHOBP62745 196 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms