RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 SPINK13Q1W4C9 94 aa11.91□□□□□ -0.5
CAPRIN1-216ENST00000534042 ZNF575Q86XF7 245 aa11.91□□□□□ -0.5
CAPRIN1-216ENST00000534042 LRTM2Q8N967 370 aa11.91□□□□□ -0.5
CAPRIN1-216ENST00000534042 OR11H7Q8NGC8 314 aa11.91□□□□□ -0.5
CAPRIN1-216ENST00000534042 ATG101Q9BSB4 218 aa11.91□□□□□ -0.5
CAPRIN1-216ENST00000534042 LYRM9A8MSI8 78 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 PRSS46E5RG02 174 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 M0R2Z0 102 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 TMBIM6P55061 237 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 B2MP61769 119 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 AKR1C1Q04828 323 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 FGL1Q08830 312 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 IGFL4Q6B9Z1 124 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 BCL7BQ9BQE9 202 aa11.9□□□□□ -0.5
CAPRIN1-216ENST00000534042 CRXO43186 299 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-216ENST00000534042 PRM2P04554 102 aa11.89□□□□□ -0.51
CAPRIN1-216ENST00000534042 DEFB130BP0DP73 79 aa11.89□□□□□ -0.51
CAPRIN1-216ENST00000534042 DEFB130AP0DP74 79 aa11.89□□□□□ -0.51
CAPRIN1-216ENST00000534042 AP3S2P59780 193 aa11.89□□□□□ -0.51
CAPRIN1-216ENST00000534042 SPANXN5Q5MJ07 72 aa11.89□□□□□ -0.51
CAPRIN1-216ENST00000534042 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-216ENST00000534042 SLIRPQ9GZT3 109 aaKnown RBP11.89□□□□□ -0.51
CAPRIN1-216ENST00000534042 TRAV8-2A0A0B4J237 113 aa11.88□□□□□ -0.51
CAPRIN1-216ENST00000534042 SFT2D2O95562 160 aa11.88□□□□□ -0.51
CAPRIN1-216ENST00000534042 TSPOP30536 169 aa11.88□□□□□ -0.51
CAPRIN1-216ENST00000534042 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
CAPRIN1-216ENST00000534042 TOMM5Q8N4H5 51 aa11.88□□□□□ -0.51
CAPRIN1-216ENST00000534042 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
CAPRIN1-216ENST00000534042 ZNF738Q8NE65 137 aa11.88□□□□□ -0.51
CAPRIN1-216ENST00000534042 STRAPQ9Y3F4 350 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-216ENST00000534042 RYR1P21817 5038 aa11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 F5H768 121 aa11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 H3BRN7 92 aa11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 HOXB5P09067 269 aa11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 RAP2BP61225 183 aa11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 PPP1R1AQ13522 171 aa11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 TMEM144Q7Z5S9 345 aa11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 MCFD2Q8NI22 146 aa11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 SLC25A39Q9BZJ4 359 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-216ENST00000534042 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 SMCO3A2RU48 225 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 H3BP45 60 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 BOLA2-SMG1P6H3BVE0 249 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 NUDT3O95989 172 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 IL5P05113 134 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 RPL7P18124 248 aaKnown RBP11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 PYDC2Q56P42 97 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 ACOT7LQ6ZUV0 252 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 TRIM63Q969Q1 353 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 LINC01587Q99440 93 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 SHANK2-AS3Q9BTD1 123 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 PPP1R14DQ9NXH3 145 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 HIGD1AQ9Y241 93 aa11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 DYNC1H1Q14204 4646 aaKnown RBP11.86□□□□□ -0.51
CAPRIN1-216ENST00000534042 TRAV12-2A0A075B6T6 113 aa11.85□□□□□ -0.51
CAPRIN1-216ENST00000534042 AZU1P20160 251 aa11.85□□□□□ -0.51
CAPRIN1-216ENST00000534042 RHOBP62745 196 aa11.85□□□□□ -0.51
CAPRIN1-216ENST00000534042 HIST1H1AQ02539 215 aaPredicted RBP11.85□□□□□ -0.51
CAPRIN1-216ENST00000534042 TNP2Q05952 138 aa11.85□□□□□ -0.51
CAPRIN1-216ENST00000534042 FCN2Q15485 313 aa11.85□□□□□ -0.51
CAPRIN1-216ENST00000534042 CYP2G1PQ6ZSU1 146 aa11.85□□□□□ -0.51
CAPRIN1-216ENST00000534042 NBDYA0A0U1RRE5 68 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 PLAC8L1A1L4L8 177 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 HYPMO75409 117 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 ATP5G1P05496 136 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 OR5G3P0C626 314 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 ATP5G3P48201 142 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 CCL18P55774 89 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 TMEM256Q8N2U0 113 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 OR8A1Q8NGG7 326 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 KRTAP4-5Q9BYR2 181 aa11.84□□□□□ -0.51
CAPRIN1-216ENST00000534042 CBY3A6NI87 242 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 C16orf90A8MZG2 172 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 H3BMQ9 156 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 LINC00869P0C866 280 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 CXCL3P19876 107 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 TAS2R60P59551 318 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 ZNRF2Q8NHG8 242 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 LRRC20Q8TCA0 184 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 DEDD2Q8WXF8 326 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
CAPRIN1-216ENST00000534042 PKD1P98161 4303 aa11.82□□□□□ -0.52
CAPRIN1-216ENST00000534042 HTN1P15515 57 aa11.82□□□□□ -0.52
CAPRIN1-216ENST00000534042 PLP1P60201 277 aa11.82□□□□□ -0.52
CAPRIN1-216ENST00000534042 SELENOTP62341 195 aa11.82□□□□□ -0.52
CAPRIN1-216ENST00000534042 POLR2GP62487 172 aaKnown RBP eCLIP11.82□□□□□ -0.52
CAPRIN1-216ENST00000534042 ID3Q02535 119 aa11.82□□□□□ -0.52
CAPRIN1-216ENST00000534042 PSG3Q16557 428 aa11.82□□□□□ -0.52
CAPRIN1-216ENST00000534042 S100A7AQ86SG5 101 aa11.82□□□□□ -0.52
CAPRIN1-216ENST00000534042 A0A087X0K7 114 aa11.81□□□□□ -0.52
CAPRIN1-216ENST00000534042 C16orf74Q96GX8 76 aa11.81□□□□□ -0.52
CAPRIN1-216ENST00000534042 UHRF2Q96PU4 802 aa11.81□□□□□ -0.52
CAPRIN1-216ENST00000534042 TIMM8BQ9Y5J9 83 aaPredicted RBP11.81□□□□□ -0.52
CAPRIN1-216ENST00000534042 V9GYH0 126 aa11.81□□□□□ -0.52
CAPRIN1-216ENST00000534042 ADAP1O75689 374 aa11.8□□□□□ -0.52
CAPRIN1-216ENST00000534042 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
CAPRIN1-216ENST00000534042 CLINT1Q14677 625 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms