RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CIB3Q96Q77 187 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-215ENST00000533946 MGST2Q99735 147 aa6.9□□□□□ -1.3
SSBP3-215ENST00000533946 PARD6GQ9BYG4 376 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-215ENST00000533946 SLC25A39Q9BZJ4 359 aaPredicted RBP6.9□□□□□ -1.3
SSBP3-215ENST00000533946 LSM5Q9Y4Y9 91 aaKnown RBP6.9□□□□□ -1.3
SSBP3-215ENST00000533946 HERC2O95714 4834 aa6.9□□□□□ -1.31
SSBP3-215ENST00000533946 ZNF705FA8MVS1 300 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-215ENST00000533946 IGLL5B9A064 214 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 PRAC2D3DTV9 90 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 M0R2Z0 102 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 SLC17A3O00476 420 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 CRXO43186 299 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-215ENST00000533946 IL5P05113 134 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 H2AFB2P0C5Z0 115 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 ATF4P18848 351 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-215ENST00000533946 AP2S1P53680 142 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-215ENST00000533946 ATP5IP56385 69 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-215ENST00000533946 FGL1Q08830 312 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 MORN3Q6PF18 240 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-215ENST00000533946 ZNF705AQ6ZN79 300 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-215ENST00000533946 ZNF431Q8TF32 576 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-215ENST00000533946 TMEM37Q8WXS4 190 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 SHANK2-AS3Q9BTD1 123 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 ARL6Q9H0F7 186 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 SLC45A2Q9UMX9 530 aa6.89□□□□□ -1.31
SSBP3-215ENST00000533946 TRAV12-2A0A075B6T6 113 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 AGPAT2O15120 278 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 SCGB2A1O75556 95 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 IFNA21P01568 189 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 OR5G3P0C626 314 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 AZU1P20160 251 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 PSMB3P49720 205 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 SNRPD3P62318 126 aaKnown RBP6.88□□□□□ -1.31
SSBP3-215ENST00000533946 FCN2Q15485 313 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 C1orf194Q5T5A4 169 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 FOXI2Q6ZQN5 318 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 C12orf45Q8N5I9 185 aaPredicted RBP6.88□□□□□ -1.31
SSBP3-215ENST00000533946 TMEM217Q8N7C4 229 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 C7orf50Q9BRJ6 194 aaKnown RBP6.88□□□□□ -1.31
SSBP3-215ENST00000533946 CACFD1Q9UGQ2 172 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 RFNGQ9Y644 331 aa6.88□□□□□ -1.31
SSBP3-215ENST00000533946 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 C5orf51A6NDU8 294 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 CENPXA8MT69 81 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 ZNF705GA8MUZ8 300 aaPredicted RBP6.87□□□□□ -1.31
SSBP3-215ENST00000533946 H0YIZ8 118 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 H3BQ15 152 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 EIF3GO75821 320 aaKnown RBP eCLIP6.87□□□□□ -1.31
SSBP3-215ENST00000533946 MIFP14174 115 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 CNN1P51911 297 aaKnown RBP6.87□□□□□ -1.31
SSBP3-215ENST00000533946 DLK1P80370 383 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 RAB32Q13637 225 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 SPINK13Q1W4C9 94 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 GCSAMLQ5JQS6 135 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 MIC13Q5XKP0 118 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 BAP18Q8IXM2 172 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 HIGD1AQ9Y241 93 aa6.87□□□□□ -1.31
SSBP3-215ENST00000533946 A8MTW9 85 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 ISLRO14498 428 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 TSC22D2O75157 780 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 HYPMO75409 117 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 PLP1P60201 277 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 PSG9Q00887 426 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 OPCMLQ14982 345 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 NRARPQ7Z6K4 114 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 OR11H7Q8NGC8 314 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 C2CD4CQ8TF44 421 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 C2orf50Q96LR7 162 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 TMEM147Q9BVK8 224 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 MFFQ9GZY8 342 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 ARV1Q9H2C2 271 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 SEPSECSQ9HD40 501 aaKnown RBP6.86□□□□□ -1.31
SSBP3-215ENST00000533946 OR5AC2Q9NZP5 309 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 NDUFA13Q9P0J0 144 aa6.86□□□□□ -1.31
SSBP3-215ENST00000533946 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-215ENST00000533946 IGHV4-4A0A075B6R2 117 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 FAM240BA0A1B0GVZ2 78 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 PLAC8L1A1L4L8 177 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 CXCL3P19876 107 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 ID1P41134 155 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 GALR1P47211 349 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 BCAP31P51572 246 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 S100A10P60903 97 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 RPP30P78346 268 aaKnown RBP6.85□□□□□ -1.31
SSBP3-215ENST00000533946 NHLH2Q02577 135 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 ASAH1Q13510 395 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 SPATA31B1PQ5VZV4 182 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 Q6ZQT7 251 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 OR10P1Q8NGE3 313 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 CCDC32Q9BV29 185 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 NPVFQ9HCQ7 196 aa6.85□□□□□ -1.31
SSBP3-215ENST00000533946 DEFB131BA0A096LNP1 70 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 UPK1BO75841 260 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 FABP1P07148 127 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 CAV2P51636 162 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 TAS2R30P59541 319 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 FAM222AQ5U5X8 452 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 LGALS9CQ6DKI2 356 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 TEPPQ6URK8 271 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms