RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 CASQ2O14958 399 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-215ENST00000533818 FGL1Q08830 312 aa6.75□□□□□ -1.33
CSDE1-215ENST00000533818 GFI1BQ5VTD9 330 aa6.75□□□□□ -1.33
CSDE1-215ENST00000533818 ETFRF1Q6IPR1 90 aa6.75□□□□□ -1.33
CSDE1-215ENST00000533818 HOGA1Q86XE5 327 aa6.75□□□□□ -1.33
CSDE1-215ENST00000533818 RNASEH2CQ8TDP1 164 aaKnown RBP6.75□□□□□ -1.33
CSDE1-215ENST00000533818 SLC25A32Q9H2D1 315 aa6.75□□□□□ -1.33
CSDE1-215ENST00000533818 SLC25A22Q9H936 323 aa6.75□□□□□ -1.33
CSDE1-215ENST00000533818 TRAV8-3A0A0A6YYJ7 113 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 TRAV8-6A0A0B4J262 113 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 TRGV4A0A0C4DH28 118 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 IFITM5A6NNB3 132 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 GPR31O00270 319 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 SPINK4O60575 86 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 ORM1P02763 201 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 HSMCR30P0CW71 290 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 WDR73Q6P4I2 378 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 PYGO2Q9BRQ0 406 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 SLC25A31Q9H0C2 315 aa6.74□□□□□ -1.33
CSDE1-215ENST00000533818 TRAV12-3A0A0B4J271 114 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 SNRPGP15A8MWD9 76 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 PPT1P50897 306 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 TAS2R20P59543 309 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 ZNF90Q03938 601 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 ZNF846Q147U1 533 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 PHLDA2Q53GA4 152 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 ARRDC1Q8N5I2 433 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 ZNF680Q8NEM1 530 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 OR5AP2Q8NGF4 316 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 ATP6V0E2Q8NHE4 81 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 VGLL1Q99990 258 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 PARD6GQ9BYG4 376 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-215ENST00000533818 KLF12Q9Y4X4 402 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 COX11Q9Y6N1 276 aa6.73□□□□□ -1.33
CSDE1-215ENST00000533818 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-215ENST00000533818 ZFP92A6NM28 416 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 J3KRW8 73 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 S100GP29377 79 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 TIRAPP58753 221 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 KLF9Q13886 244 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-215ENST00000533818 C2orf83Q53S99 150 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 OR10J3Q5JRS4 329 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 DHRS11Q6UWP2 260 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 CCDC190Q86UF4 302 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 OR1B1Q8NGR6 318 aa6.72□□□□□ -1.33
CSDE1-215ENST00000533818 ZNF2Q9BSG1 426 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-215ENST00000533818 HEYLQ9NQ87 328 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-215ENST00000533818 MRPL16Q9NX20 251 aaKnown RBP6.72□□□□□ -1.33
CSDE1-215ENST00000533818 IGKV1-5P01602 117 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 C1orf146Q5VVC0 180 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 REG3GQ6UW15 175 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 AHSA2Q719I0 299 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 SH2D6Q7Z4S9 175 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 TBC1D26Q86UD7 250 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 ZNF555Q8NEP9 628 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 OR4D5Q8NGN0 318 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 RPUSD4Q96CM3 377 aaKnown RBP6.71□□□□□ -1.34
CSDE1-215ENST00000533818 EHFQ9NZC4 300 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 TMEM56-RWDD3S4R434 201 aa6.71□□□□□ -1.34
CSDE1-215ENST00000533818 PDCD5O14737 125 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 SCGNO76038 276 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 FABP1P07148 127 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 PSMA1P25786 263 aaKnown RBP6.7□□□□□ -1.34
CSDE1-215ENST00000533818 RFX2P48378 723 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 AKR1C2P52895 323 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 SPHARQ15513 63 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 LINC01559Q495D7 138 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 IQCF2Q8IXL9 164 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 UFD1Q92890 307 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 GPR82Q96P67 336 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 MND1Q9BWT6 205 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 DIABLOQ9NR28 239 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 PSORS1C1Q9UIG5 152 aa6.7□□□□□ -1.34
CSDE1-215ENST00000533818 TRAV8-1A0A0A6YYK1 113 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 SFTA3P0C7M3 94 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 CXCL3P19876 107 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 HRH1P35367 487 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 TCL1AP56279 114 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 SPCS3P61009 180 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 TRAM1Q15629 374 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 STEAP1BQ6NZ63 245 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 ZBTB8BQ8NAP8 495 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-215ENST00000533818 NHLRC2Q8NBF2 726 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 TMEM170AQ8WVE7 144 aa6.69□□□□□ -1.34
CSDE1-215ENST00000533818 IGKV1D-37A0A075B6S9 117 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 LOC100131303A0A0U1RQF7 123 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 PITX3O75364 302 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 FABP5Q01469 135 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 TOR2AQ5JU69 321 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 LRRC20Q8TCA0 184 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 PYDC1Q8WXC3 89 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 C9orf16Q9BUW7 83 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 FXYD6Q9H0Q3 95 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 KIF25-AS1Q9Y6Z4 181 aa6.68□□□□□ -1.34
CSDE1-215ENST00000533818 PHOX2AO14813 284 aa6.67□□□□□ -1.34
CSDE1-215ENST00000533818 ANXA2RQ3ZCQ2 193 aa6.67□□□□□ -1.34
CSDE1-215ENST00000533818 FAM122CQ6P4D5 195 aa6.67□□□□□ -1.34
CSDE1-215ENST00000533818 NOXA1Q86UR1 476 aa6.67□□□□□ -1.34
CSDE1-215ENST00000533818 Q8N3U1 123 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms