RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 RRNAD1Q96FB5 475 aaKnown RBP8.29□□□□□ -1.08
SVIP-205ENST00000533774 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.29□□□□□ -1.08
SVIP-205ENST00000533774 CACNG5Q9UF02 275 aa8.29□□□□□ -1.08
SVIP-205ENST00000533774 IGKV1OR2-108A0A075B7D4 117 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 ZFP92A6NM28 416 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 CEBPZOSA8MTT3 80 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 PLA2G1BP04054 148 aaKnown RBP8.28□□□□□ -1.08
SVIP-205ENST00000533774 TGFBR1P36897 503 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
SVIP-205ENST00000533774 UBE2NLQ5JXB2 153 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 NFE4Q86UQ8 179 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 LHFPL1Q86WI0 220 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 SLC25A22Q9H936 323 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
SVIP-205ENST00000533774 IGLV5-52A0A0A0MRZ9 124 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 LOC100506127A0A0U1RQW1 187 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 ZNF98A6NK75 572 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 ATG12O94817 140 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 RCVRNP35243 200 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 GALR1P47211 349 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 HIST1H1AQ02539 215 aaPredicted RBP8.27□□□□□ -1.09
SVIP-205ENST00000533774 SAMD13Q5VXD3 122 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 Q6ZTI0 123 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 SAMD12Q8N8I0 201 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 RNASE11Q8TAA1 199 aaKnown RBP8.27□□□□□ -1.09
SVIP-205ENST00000533774 IL22RA2Q969J5 263 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 ZNF486Q96H40 463 aaPredicted RBP8.27□□□□□ -1.09
SVIP-205ENST00000533774 LRP2P98164 4655 aa8.27□□□□□ -1.09
SVIP-205ENST00000533774 LRCOL1A6NCL2 159 aa8.26□□□□□ -1.09
SVIP-205ENST00000533774 SNRPGP15A8MWD9 76 aa8.26□□□□□ -1.09
SVIP-205ENST00000533774 CDS2O95674 445 aa8.26□□□□□ -1.09
SVIP-205ENST00000533774 ZNF182P17025 639 aaPredicted RBP8.26□□□□□ -1.09
SVIP-205ENST00000533774 RHOBP62745 196 aa8.26□□□□□ -1.09
SVIP-205ENST00000533774 SELENOHQ8IZQ5 122 aaKnown RBP8.26□□□□□ -1.09
SVIP-205ENST00000533774 ZNF738Q8NE65 137 aa8.26□□□□□ -1.09
SVIP-205ENST00000533774 OR8A1Q8NGG7 326 aa8.26□□□□□ -1.09
SVIP-205ENST00000533774 GLYATL2Q8WU03 294 aa8.26□□□□□ -1.09
SVIP-205ENST00000533774 CNBD2Q96M20 576 aa8.26□□□□□ -1.09
SVIP-205ENST00000533774 PARD6GQ9BYG4 376 aaPredicted RBP8.26□□□□□ -1.09
SVIP-205ENST00000533774 RLN2P04090 185 aa8.25□□□□□ -1.09
SVIP-205ENST00000533774 OR5AC1P0C628 307 aa8.25□□□□□ -1.09
SVIP-205ENST00000533774 TMEM182Q6ZP80 229 aaPredicted RBP8.25□□□□□ -1.09
SVIP-205ENST00000533774 FAM219AQ8IW50 185 aa8.25□□□□□ -1.09
SVIP-205ENST00000533774 TMEM222Q9H0R3 208 aa8.25□□□□□ -1.09
SVIP-205ENST00000533774 MSRB1Q9NZV6 116 aa8.25□□□□□ -1.09
SVIP-205ENST00000533774 H7BYZ3 331 aa8.24□□□□□ -1.09
SVIP-205ENST00000533774 ADAP1O75689 374 aa8.24□□□□□ -1.09
SVIP-205ENST00000533774 GATA2P23769 480 aaPredicted RBP8.24□□□□□ -1.09
SVIP-205ENST00000533774 SNX29P2Q8IUI4 249 aa8.24□□□□□ -1.09
SVIP-205ENST00000533774 OR13C8Q8NGS7 320 aa8.24□□□□□ -1.09
SVIP-205ENST00000533774 TRGV9Q99603 122 aa8.24□□□□□ -1.09
SVIP-205ENST00000533774 COPZ2Q9P299 210 aa8.24□□□□□ -1.09
SVIP-205ENST00000533774 BLOC1S6Q9UL45 172 aa8.24□□□□□ -1.09
SVIP-205ENST00000533774 NPIPB6E9PJ23 425 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 OXTP01178 125 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 GPX4P36969 197 aaPredicted RBP8.23□□□□□ -1.09
SVIP-205ENST00000533774 CDKN1BP46527 198 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 FGL1Q08830 312 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 Q6ZSA8 131 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 NOXA1Q86UR1 476 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 WFDC10BQ8IUB3 73 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 LGI3Q8N145 548 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 OR4D10Q8NGI6 311 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 OR1B1Q8NGR6 318 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 SLC35E1Q96K37 410 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 LINC00467Q9BRT7 94 aa8.23□□□□□ -1.09
SVIP-205ENST00000533774 CXCL3P19876 107 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 RPS19P39019 145 aaKnown RBP8.22□□□□□ -1.09
SVIP-205ENST00000533774 GABARAPL2P60520 117 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 GFI1BQ5VTD9 330 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 THAP8Q8NA92 274 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 OR4D5Q8NGN0 318 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 MARCH1Q8TCQ1 289 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 NTN5Q8WTR8 489 aaPredicted RBP8.22□□□□□ -1.09
SVIP-205ENST00000533774 RBPMSQ93062 196 aaKnown RBP8.22□□□□□ -1.09
SVIP-205ENST00000533774 RBKSQ9H477 322 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 PPP1R14DQ9NXH3 145 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 U3KQ87 197 aa8.22□□□□□ -1.09
SVIP-205ENST00000533774 TNXBP22105 4242 aa8.21□□□□□ -1.09
SVIP-205ENST00000533774 TEX13DA0A0J9YY54 714 aaPredicted RBP8.21□□□□□ -1.1
SVIP-205ENST00000533774 SNURFLB1AK76 121 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 TMEM127O75204 238 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 CD3DP04234 171 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 PSG3Q16557 428 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 TMEM268Q5VZI3 342 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 CCDC71LQ8N9Z2 235 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 DTD1Q8TEA8 209 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 RTBDNQ9BSG5 229 aaPredicted RBP8.21□□□□□ -1.1
SVIP-205ENST00000533774 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 LY96Q9Y6Y9 160 aa8.21□□□□□ -1.1
SVIP-205ENST00000533774 SCO2A0A1W2PP80 73 aa8.2□□□□□ -1.1
SVIP-205ENST00000533774 GABARAPH6UMI1 98 aa8.2□□□□□ -1.1
SVIP-205ENST00000533774 ZNF324O75467 553 aaPredicted RBP8.2□□□□□ -1.1
SVIP-205ENST00000533774 GABARAPO95166 117 aa8.2□□□□□ -1.1
SVIP-205ENST00000533774 C1QBP02746 253 aa8.2□□□□□ -1.1
SVIP-205ENST00000533774 FABP1P07148 127 aa8.2□□□□□ -1.1
SVIP-205ENST00000533774 ORM2P19652 201 aa8.2□□□□□ -1.1
SVIP-205ENST00000533774 DAZ2Q13117 558 aaKnown RBP8.2□□□□□ -1.1
SVIP-205ENST00000533774 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms