RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TRAV5A0A0B4J249 113 aa13.13□□□□□ -0.31
NXF1-216ENST00000533499 CD5P06127 495 aa13.13□□□□□ -0.31
NXF1-216ENST00000533499 GALR1P47211 349 aa13.13□□□□□ -0.31
NXF1-216ENST00000533499 ACOT6Q3I5F7 207 aaPredicted RBP13.13□□□□□ -0.31
NXF1-216ENST00000533499 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
NXF1-216ENST00000533499 OR2G3Q8NGZ4 309 aa13.13□□□□□ -0.31
NXF1-216ENST00000533499 GATAD1Q8WUU5 269 aa13.13□□□□□ -0.31
NXF1-216ENST00000533499 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
NXF1-216ENST00000533499 TSPAN4O14817 238 aa13.12□□□□□ -0.31
NXF1-216ENST00000533499 ATF4P18848 351 aaPredicted RBP13.12□□□□□ -0.31
NXF1-216ENST00000533499 RAB2AP61019 212 aa13.12□□□□□ -0.31
NXF1-216ENST00000533499 EGFEM1PQ0D2K5 195 aa13.12□□□□□ -0.31
NXF1-216ENST00000533499 SPATA31B1PQ5VZV4 182 aa13.12□□□□□ -0.31
NXF1-216ENST00000533499 FAM122CQ6P4D5 195 aa13.12□□□□□ -0.31
NXF1-216ENST00000533499 GTSCR1Q86UQ5 136 aa13.12□□□□□ -0.31
NXF1-216ENST00000533499 SPAG8Q99932 426 aaPredicted RBP13.12□□□□□ -0.31
NXF1-216ENST00000533499 PSMG3Q9BT73 122 aaPredicted RBP13.12□□□□□ -0.31
NXF1-216ENST00000533499 MS4A6AQ9H2W1 248 aa13.12□□□□□ -0.31
NXF1-216ENST00000533499 NBEAL1Q6ZS30 2694 aa13.11□□□□□ -0.31
NXF1-216ENST00000533499 SNRPCP09234 159 aaKnown RBP13.11□□□□□ -0.31
NXF1-216ENST00000533499 C4BPBP20851 252 aa13.11□□□□□ -0.31
NXF1-216ENST00000533499 CD81P60033 236 aa13.11□□□□□ -0.31
NXF1-216ENST00000533499 EIF5AP63241 154 aaKnown RBP13.11□□□□□ -0.31
NXF1-216ENST00000533499 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
NXF1-216ENST00000533499 FAM90A2PQ658T7 463 aa13.11□□□□□ -0.31
NXF1-216ENST00000533499 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
NXF1-216ENST00000533499 C9orf62Q8N4C0 152 aa13.11□□□□□ -0.31
NXF1-216ENST00000533499 RNF24Q9Y225 148 aa13.11□□□□□ -0.31
NXF1-216ENST00000533499 A0A1W2PPV4 95 aa13.1□□□□□ -0.31
NXF1-216ENST00000533499 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
NXF1-216ENST00000533499 TPT1P13693 172 aaKnown RBP13.1□□□□□ -0.31
NXF1-216ENST00000533499 RPL7P18124 248 aaKnown RBP13.1□□□□□ -0.31
NXF1-216ENST00000533499 RHOBP62745 196 aa13.1□□□□□ -0.31
NXF1-216ENST00000533499 OR10G4Q8NGN3 311 aa13.1□□□□□ -0.31
NXF1-216ENST00000533499 OR10G9Q8NGN4 311 aa13.1□□□□□ -0.31
NXF1-216ENST00000533499 OR10G7Q8NGN6 311 aa13.1□□□□□ -0.31
NXF1-216ENST00000533499 GPR82Q96P67 336 aa13.1□□□□□ -0.31
NXF1-216ENST00000533499 SEPSECSQ9HD40 501 aaKnown RBP13.1□□□□□ -0.31
NXF1-216ENST00000533499 UBQLN2Q9UHD9 624 aa13.1□□□□□ -0.31
NXF1-216ENST00000533499 M6PRP20645 277 aa13.09□□□□□ -0.31
NXF1-216ENST00000533499 AKR1C8PQ5T2L2 129 aa13.09□□□□□ -0.31
NXF1-216ENST00000533499 KPRPQ5T749 579 aaPredicted RBP13.09□□□□□ -0.31
NXF1-216ENST00000533499 BPIFA4PQ86YQ2 179 aa13.09□□□□□ -0.31
NXF1-216ENST00000533499 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
NXF1-216ENST00000533499 NRN1Q9NPD7 142 aa13.09□□□□□ -0.31
NXF1-216ENST00000533499 AURKAIP1Q9NWT8 199 aaPredicted RBP13.09□□□□□ -0.31
NXF1-216ENST00000533499 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
NXF1-216ENST00000533499 H3BTX0 84 aa13.08□□□□□ -0.32
NXF1-216ENST00000533499 MBP02144 154 aa13.08□□□□□ -0.32
NXF1-216ENST00000533499 CD7P09564 240 aa13.08□□□□□ -0.32
NXF1-216ENST00000533499 SERF2P84101 59 aa13.08□□□□□ -0.32
NXF1-216ENST00000533499 MRPL32Q9BYC8 188 aaKnown RBP13.08□□□□□ -0.32
NXF1-216ENST00000533499 BOLA2-SMG1P6H3BVE0 249 aa13.07□□□□□ -0.32
NXF1-216ENST00000533499 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
NXF1-216ENST00000533499 OR7C2O60412 319 aa13.07□□□□□ -0.32
NXF1-216ENST00000533499 DEFA6Q01524 100 aa13.07□□□□□ -0.32
NXF1-216ENST00000533499 TMEM41BQ5BJD5 291 aa13.07□□□□□ -0.32
NXF1-216ENST00000533499 BAP18Q8IXM2 172 aa13.07□□□□□ -0.32
NXF1-216ENST00000533499 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
NXF1-216ENST00000533499 SMAD5-AS1Q9Y6J3 95 aa13.07□□□□□ -0.32
NXF1-216ENST00000533499 ZNF688P0C7X2 276 aa13.06□□□□□ -0.32
NXF1-216ENST00000533499 PYYP10082 97 aa13.06□□□□□ -0.32
NXF1-216ENST00000533499 CDC34P49427 236 aaPredicted RBP13.06□□□□□ -0.32
NXF1-216ENST00000533499 DEFB121Q5J5C9 76 aa13.06□□□□□ -0.32
NXF1-216ENST00000533499 FAM24BQ8N5W8 94 aa13.06□□□□□ -0.32
NXF1-216ENST00000533499 TMED6Q8WW62 240 aa13.06□□□□□ -0.32
NXF1-216ENST00000533499 C16orf92Q96LL3 132 aa13.06□□□□□ -0.32
NXF1-216ENST00000533499 LINC00052Q96N35 136 aa13.06□□□□□ -0.32
NXF1-216ENST00000533499 SLC25A2Q9BXI2 301 aa13.06□□□□□ -0.32
NXF1-216ENST00000533499 ACTR3CQ9C0K3 210 aaPredicted RBP13.06□□□□□ -0.32
NXF1-216ENST00000533499 K7EQG2 157 aa13.05□□□□□ -0.32
NXF1-216ENST00000533499 SPP1P10451 314 aa13.05□□□□□ -0.32
NXF1-216ENST00000533499 ID1P41134 155 aa13.05□□□□□ -0.32
NXF1-216ENST00000533499 TAS2R45P59539 299 aa13.05□□□□□ -0.32
NXF1-216ENST00000533499 SLC51BQ86UW2 128 aa13.05□□□□□ -0.32
NXF1-216ENST00000533499 BLNKQ8WV28 456 aa13.05□□□□□ -0.32
NXF1-216ENST00000533499 WFDC10AQ9H1F0 79 aa13.05□□□□□ -0.32
NXF1-216ENST00000533499 RPRMQ9NS64 109 aa13.05□□□□□ -0.32
NXF1-216ENST00000533499 OR11H12B2RN74 326 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 OR10J4P0C629 311 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 DEFB131AP59861 70 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 KHDC3LQ587J8 217 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 PSMG4Q5JS54 123 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 IQCF2Q8IXL9 164 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 PAXXQ9BUH6 204 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 OR51M1Q9H341 326 aa13.04□□□□□ -0.32
NXF1-216ENST00000533499 TRAV2A0A0B4J234 112 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 SEC11BP0C7V7 166 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 MEOX2P50222 304 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
NXF1-216ENST00000533499 UBE2L3P68036 154 aaKnown RBP13.03□□□□□ -0.32
NXF1-216ENST00000533499 EIF5AL1Q6IS14 154 aaKnown RBP13.03□□□□□ -0.32
NXF1-216ENST00000533499 APRG1Q8IVJ8 170 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 RPP25LQ8N5L8 163 aaKnown RBP13.03□□□□□ -0.32
NXF1-216ENST00000533499 DEFB125Q8N687 156 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 DCANP1Q8TF63 244 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms