RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 OR1I1O60431 355 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 MT-ND6P03923 174 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 CTSDP07339 412 aaPredicted RBP2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 TMEM258P61165 79 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 COPZ1P61923 177 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 RELAQ04206 551 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 PYDC2Q56P42 97 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 PRR9Q5T870 116 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 PKMYT1Q99640 499 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 CYTL1Q9NRR1 136 aa2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 RIMS1Q86UR5 1692 aaKnown RBP2.43□□□□□ -2.02
AC055878.1-201ENST00000531858 PTPRGP23470 1445 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 BCL9LQ86UU0 1499 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 PROSCO94903 275 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 PMP2P02689 132 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 TRGC1P0CF51 173 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 SAA1P0DJI8 122 aaPredicted RBP2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 CRYGAP11844 174 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 TPT1P13693 172 aaKnown RBP2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 MIFP14174 115 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 AKR1D1P51857 326 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 MAXP61244 160 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 ZNF345Q14585 488 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 ASB16-AS1Q495Z4 193 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 TEX29Q8N6K0 151 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 OR8B3Q8NGG8 313 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 CCL4L1Q8NHW4 92 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 ZC2HC1AQ96GY0 325 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 TCEAL7Q9BRU2 100 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 TMEM191AQ9H0A3 160 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 PRO2289Q9P1D8 64 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 TAF1LQ8IZX4 1826 aa2.42□□□□□ -2.02
AC055878.1-201ENST00000531858 KDM5CP41229 1560 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 ROCK2O75116 1388 aaKnown RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 NPFFO15130 113 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 RTL8CO15255 209 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 HBDP02042 147 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 SHBGP04278 402 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 HLA-DRB4P13762 266 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 CSRP1P21291 193 aaKnown RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 PEBP1P30086 187 aaKnown RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 ZNF93P35789 620 aaPredicted RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 FOXA3P55318 350 aaPredicted RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 LINC00315P59091 139 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 ERHP84090 104 aaKnown RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 TMEM91Q6ZNR0 172 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 TEN1Q86WV5 123 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 LINC00471Q8N535 108 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 OR5D14Q8NGL3 314 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 ZNF418Q8TF45 676 aaPredicted RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 CHCHD1Q96BP2 118 aaKnown RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 CXCL16Q9H2A7 254 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 BANF2Q9H503 90 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 HLA-DRB4X5D2U9 266 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 ARHGEF28Q8N1W1 1705 aaKnown RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 COL16A1Q07092 1604 aaPredicted RBP2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 FAM135BQ49AJ0 1406 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 MAST2Q6P0Q8 1798 aa2.41□□□□□ -2.02
AC055878.1-201ENST00000531858 DENND4CQ5VZ89 1909 aa2.4□□□□□ -2.02
AC055878.1-201ENST00000531858 GRIN2AQ12879 1464 aa2.4□□□□□ -2.02
AC055878.1-201ENST00000531858 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 TRAV27A0A087WT01 109 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 A0A1B0GVG6 124 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 YPEL1O60688 119 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 LINC00694P0DN24 101 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 DEFA4P12838 97 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 FABP4P15090 132 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 HIST1H1BP16401 226 aaKnown RBP2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 HINT1P49773 126 aaPredicted RBP2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 MRPS10P82664 201 aaKnown RBP2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 CDK5R1Q15078 307 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 ZNF791Q3KP31 576 aaPredicted RBP2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 IDO2Q6ZQW0 420 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 Q6ZTI0 123 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 RETNLBQ9BQ08 111 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 TAF9BQ9HBM6 251 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 CCDC167Q9P0B6 97 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 TNFSF18Q9UNG2 199 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 CCL26Q9Y258 94 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 DLC1Q96QB1 1528 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 NUP214P35658 2090 aaPredicted RBP2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 SCN4AP35499 1836 aa2.4□□□□□ -2.03
AC055878.1-201ENST00000531858 NUP205Q92621 2012 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 DOCK6Q96HP0 2047 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 SLIT2O94813 1529 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 ATG2BQ96BY7 2078 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 TMSB15BA0A087X1C1 80 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 PNMA8CA0A1B0GUJ8 204 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 LOC107986453A0A1B0GWG9 222 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 IGF2P01344 180 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 IGLV6-57P01721 117 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 TCRAP04437 139 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 APODP05090 189 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 SLC25A5P05141 298 aaKnown RBP2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 CTSGP08311 255 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 CCL4P13236 92 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms