RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 EBLN2Q6P2I7 272 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 OR1S1Q8NH92 325 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 SLC35E1Q96K37 410 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 NEU1Q99519 415 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 SLC25A21Q9BQT8 299 aaPredicted RBP6.27□□□□□ -1.41
USF1-210ENST00000531842 GOLT1BQ9Y3E0 138 aa6.27□□□□□ -1.41
USF1-210ENST00000531842 C9orf170A2RU37 121 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 ZNF705GA8MUZ8 300 aaPredicted RBP6.26□□□□□ -1.41
USF1-210ENST00000531842 DEFB130BP0DP73 79 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 DEFB130AP0DP74 79 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 FAUP35544 74 aaKnown RBP6.26□□□□□ -1.41
USF1-210ENST00000531842 PSG9Q00887 426 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 IFITM3Q01628 133 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 ZNF90Q03938 601 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 GAMTQ14353 236 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 CNPY1Q3B7I2 92 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 C1orf194Q5T5A4 169 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 GGNBP1Q5YKI7 109 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 OR8G2PQ6IF36 304 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 FOXI2Q6ZQN5 318 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 OR8I2Q8N0Y5 310 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 FAM210BQ96KR6 192 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 TMEM208Q9BTX3 173 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 SAV1Q9H4B6 383 aaPredicted RBP6.26□□□□□ -1.41
USF1-210ENST00000531842 NDUFA13Q9P0J0 144 aa6.26□□□□□ -1.41
USF1-210ENST00000531842 IGKV1OR2-108A0A075B7D4 117 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 DUXBA0A1W2PPF3 345 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 HBE1P02100 147 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
USF1-210ENST00000531842 HOXB5P09067 269 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 OR4E1P0C645 316 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 SLC25A6P12236 298 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 VAMP1P23763 118 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 PSMB3P49720 205 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 XGP55808 180 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 ATP5IP56385 69 aaPredicted RBP6.25□□□□□ -1.41
USF1-210ENST00000531842 UBE2MP61081 183 aaKnown RBP6.25□□□□□ -1.41
USF1-210ENST00000531842 RAB11AP62491 216 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 SRPXP78539 464 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 Q5VSD8 79 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 SPATA31B1PQ5VZV4 182 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 TRIQKQ629K1 86 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 C16orf92Q96LL3 132 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 MAGT1Q9H0U3 335 aa6.25□□□□□ -1.41
USF1-210ENST00000531842 PIGBOS1A0A0B4J2F0 54 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 TEX48A0A1B0GUV7 120 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 NAP1L6A6NFF2 107 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 F5H768 121 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 ISLRO14498 428 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 IAPPP10997 89 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 AZU1P20160 251 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 GALR1P47211 349 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 PAX9P55771 341 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 ID3Q02535 119 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 RRN3P1Q2M238 152 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 FAM78BQ5VT40 261 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 SAMD13Q5VXD3 122 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 OR4D5Q8NGN0 318 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 RNF141Q8WVD5 230 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 C20orf173Q96LM9 149 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 RSG1Q9BU20 258 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 SLC25A22Q9H936 323 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 RPRMQ9NS64 109 aa6.24□□□□□ -1.41
USF1-210ENST00000531842 PMS2P5A8MQ11 134 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 LYRM1O43325 122 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 MEOX2P50222 304 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 RPP30P78346 268 aaKnown RBP6.23□□□□□ -1.41
USF1-210ENST00000531842 OXA1LQ15070 435 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 IGFL4Q6B9Z1 124 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 TMEM182Q6ZP80 229 aaPredicted RBP6.23□□□□□ -1.41
USF1-210ENST00000531842 SSX7Q7RTT5 188 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 LYPD1Q8N2G4 141 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 C15orf53Q8NAA6 179 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 C17orf77Q96MU5 243 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
USF1-210ENST00000531842 A0A0J9YX75 114 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 PLAC8L1A1L4L8 177 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 M0R2Z0 102 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 SOCS3O14543 225 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 SYNGR2O43760 224 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 MED6O75586 246 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 CCNKO75909 580 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 CFDP00746 253 aaPredicted RBP6.22□□□□□ -1.41
USF1-210ENST00000531842 TCRBP04435 133 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 ORM2P19652 201 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 S100A7P31151 101 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 POLR2GP62487 172 aaKnown RBP eCLIP6.22□□□□□ -1.41
USF1-210ENST00000531842 FGL1Q08830 312 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 BAP18Q8IXM2 172 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 MITD1Q8WV92 249 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 TRGV9Q99603 122 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 TMEM147Q9BVK8 224 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 C20orf85Q9H1P6 137 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 Q9H8V8 135 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 ZNF586Q9NXT0 402 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 DOK5Q9P104 306 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 TNFRSF18Q9Y5U5 241 aa6.22□□□□□ -1.41
USF1-210ENST00000531842 ZNF98A6NK75 572 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 H3BP45 60 aa6.21□□□□□ -1.42
USF1-210ENST00000531842 WRBO00258 174 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms