RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 ACER3Q9NUN7 267 aa1.71□□□□□ -2.14
SVIP-203ENST00000529848 UQCC1Q9NVA1 299 aa1.71□□□□□ -2.14
SVIP-203ENST00000529848 SNX12Q9UMY4 172 aa1.71□□□□□ -2.14
SVIP-203ENST00000529848 HS3ST2Q9Y278 367 aa1.71□□□□□ -2.14
SVIP-203ENST00000529848 DUOX1Q9NRD9 1551 aa1.71□□□□□ -2.14
SVIP-203ENST00000529848 KIAA0100Q14667 2235 aaKnown RBP1.71□□□□□ -2.14
SVIP-203ENST00000529848 ABCC12Q96J65 1359 aa1.71□□□□□ -2.14
SVIP-203ENST00000529848 ROBO3Q96MS0 1386 aa1.71□□□□□ -2.14
SVIP-203ENST00000529848 ECM29Q5VYK3 1845 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 SCN10AQ9Y5Y9 1956 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 NCKAP5O14513 1909 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 TRAV8-1A0A0A6YYK1 113 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 SIGLEC16A6NMB1 481 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 C17orf51A8MQB3 221 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 ODF3BA8MYP8 253 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 C9JAW5 83 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 INMT-MINDY4F8WBC2 141 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 CD7P09564 240 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 FGF6P10767 208 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 FGF7P21781 194 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 CCL1P22362 96 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 CA7P43166 264 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 MARCKSL1P49006 195 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 EMP1P54849 157 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 TSPEAR-AS2P59090 65 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 TAS2R45P59539 299 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 FGF12P61328 243 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 COPZ1P61923 177 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 SELENOWP63302 87 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 FOXF1Q12946 379 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 SCGB2B2Q4G0G5 96 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 MORN2Q502X0 79 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 FAM201AQ5SY85 155 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 GLYATL3Q5SZD4 288 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 Q5XG85 94 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 LCN8Q6JVE9 175 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 HRCT1Q6UXD1 115 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 OOSP2Q86WS3 158 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 CTAGE3PQ8IX95 158 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 C8orf59Q8N0T1 100 aaPredicted RBP1.7□□□□□ -2.14
SVIP-203ENST00000529848 OR11H6Q8NGC7 330 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 OR8B12Q8NGG6 310 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 TERB2Q8NHR7 220 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 JOSD2Q8TAC2 188 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 ZNF675Q8TD23 568 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 ZNF418Q8TF45 676 aaPredicted RBP1.7□□□□□ -2.14
SVIP-203ENST00000529848 SLC7A6Q92536 515 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 BORCS7Q96B45 105 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 CARD19Q96LW7 228 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 LXNQ9BS40 222 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 NKX6-2Q9C056 277 aaPredicted RBP1.7□□□□□ -2.14
SVIP-203ENST00000529848 OR51I2Q9H344 312 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 DOCK5Q9H7D0 1870 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 CACYBPQ9HB71 228 aaKnown RBP1.7□□□□□ -2.14
SVIP-203ENST00000529848 GPR84Q9NQS5 396 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 METTL1Q9UBP6 276 aaKnown RBP1.7□□□□□ -2.14
SVIP-203ENST00000529848 NAT8BQ9UHF3 227 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 HIGD1AQ9Y241 93 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 CCL26Q9Y258 94 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 MINOS1-NBL1R4GNA1 71 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 SCN9AQ15858 1988 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 COL4A1P02462 1669 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 ALPK3Q96L96 1907 aa1.7□□□□□ -2.14
SVIP-203ENST00000529848 MYO9BQ13459 2157 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 TRAV30A0A087WSZ9 112 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 BORCS7-ASMTA0A0B4J1R7 106 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 TRAV38-1A0A0B4J264 116 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 TRAV26-2A0A0B4J265 109 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 DUXBA0A1W2PPF3 345 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 GRIFINA4D1Z8 144 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 H7BYZ3 331 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 I3L521 148 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 GSTZ1O43708 216 aaPredicted RBP1.69□□□□□ -2.14
SVIP-203ENST00000529848 MPC2O95563 127 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 LGALS1P09382 135 aaKnown RBP1.69□□□□□ -2.14
SVIP-203ENST00000529848 EVI2AP22794 236 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 NPPCP23582 126 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 BRS3P32247 399 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 G6PCP35575 357 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 DEFA3P59666 94 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 NCS1P62166 190 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 RPS25P62851 125 aaKnown RBP1.69□□□□□ -2.14
SVIP-203ENST00000529848 HERVK_113P63121 156 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 MRPS10P82664 201 aaKnown RBP1.69□□□□□ -2.14
SVIP-203ENST00000529848 RHOGP84095 191 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 CDK6Q00534 326 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 CAV1Q03135 178 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 SLC38A11Q08AI6 406 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 TMEM267Q0VDI3 215 aaPredicted RBP1.69□□□□□ -2.14
SVIP-203ENST00000529848 JOSD1Q15040 202 aaPredicted RBP1.69□□□□□ -2.14
SVIP-203ENST00000529848 EBPQ15125 230 aaKnown RBP1.69□□□□□ -2.14
SVIP-203ENST00000529848 PYY3Q5JQD4 70 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 IBA57Q5T440 356 aaKnown RBP1.69□□□□□ -2.14
SVIP-203ENST00000529848 GLIPR1L1Q6UWM5 242 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 OR8I2Q8N0Y5 310 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 TMEM86AQ8N2M4 240 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 DEFB125Q8N687 156 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 PLEKHB2Q96CS7 222 aa1.69□□□□□ -2.14
SVIP-203ENST00000529848 LYSMD1Q96S90 227 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms