RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 WISP1O95388 367 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 PLNP26678 52 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 UNQ6494/PRO21346Q6UXR6 183 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 LINC00479Q96M42 142 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 FREM3P0C091 2139 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 TRBV6-6A0A0A6YYG2 114 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 TRAV8-4A0A0B4J246 113 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 TOMM40O96008 361 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 RNASE2P10153 161 aaKnown RBP6.6□□□□□ -1.35
CTNND1-220ENST00000529526 SAA4P35542 130 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 TDGF1P3P51864 188 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 SAMD5Q5TGI4 173 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 KIF26BQ2KJY2 2108 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 M0R2P5 195 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 SPSB3Q6PJ21 355 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 CSTL1Q9H114 145 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 VWA8A3KMH1 1905 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 LURAP1LQ8IV03 231 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 PHLDA1Q8WV24 401 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-220ENST00000529526 ZNF479Q96JC4 524 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 TP53BP1Q12888 1972 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-220ENST00000529526 ARHGEF17Q96PE2 2063 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-220ENST00000529526 IGHG3P01860 377 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 CKS1BP61024 79 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 GUSBP1Q15486 140 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 S100A7L2Q5SY68 101 aa6.6□□□□□ -1.35
CTNND1-220ENST00000529526 ASCL4Q6XD76 172 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 UBE2DNLQ8IWF7 75 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 OR2K2Q8NGT1 345 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 RNF5Q99942 180 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 SLC25A2Q9BXI2 301 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 HSD52Q0P140 79 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 DEFB121Q5J5C9 76 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 GATD1Q8NB37 220 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 A0A087X0K7 114 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 TNFSF13O75888 250 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 DUX4L9Q6RFH8 374 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-220ENST00000529526 FOXL2NBQ6ZUU3 175 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 AMN1Q8IY45 258 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 RHPN1-AS1Q9BWJ2 59 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 MPDZO75970 2070 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 Q6ZS92 163 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 C9orf139Q6ZV77 190 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 TMEM158Q8WZ71 300 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 DPH3P1Q9H4G8 78 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 PLXNA3P51805 1871 aa6.59□□□□□ -1.35
CTNND1-220ENST00000529526 IGKV1-6A0A0C4DH72 117 aa6.59□□□□□ -1.36
CTNND1-220ENST00000529526 DTX2Q86UW9 622 aa6.59□□□□□ -1.36
CTNND1-220ENST00000529526 C8orf49Q96NF6 230 aa6.59□□□□□ -1.36
CTNND1-220ENST00000529526 FAM223BA6NKX1 122 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 OOSP1A8MZH6 123 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 SYNJ2BPP57105 145 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 FAM223AQ8IWN6 122 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 A0A087WX48 190 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 OVOL3O00110 214 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 TEX43Q6ZNM6 134 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 A0A1W2PPI3 338 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 RNF223E7ERA6 249 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 BCL6BQ8N143 479 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-220ENST00000529526 LINC00477Q96M19 166 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 CST9LQ9H4G1 147 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 ADCYAP1P18509 176 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 Q86TA4 180 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 TMEM86BQ8N661 226 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 LINC01356Q8N9X3 169 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 SDK2Q58EX2 2172 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 C3orf79P0CE67 100 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 SRSF4Q08170 494 aaKnown RBP6.58□□□□□ -1.36
CTNND1-220ENST00000529526 TMEM155Q4W5P6 130 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 MS4A6AQ9H2W1 248 aa6.58□□□□□ -1.36
CTNND1-220ENST00000529526 RPL36AP83881 106 aaKnown RBP6.57□□□□□ -1.36
CTNND1-220ENST00000529526 MORN3Q6PF18 240 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-220ENST00000529526 RPL36ALQ969Q0 106 aaKnown RBP6.57□□□□□ -1.36
CTNND1-220ENST00000529526 A8MWV9 139 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 GGTLC3B5MD39 225 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 PAX4O43316 350 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 LYL1P12980 280 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 RASL11AQ6T310 242 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 IL17RELQ6ZVW7 336 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 C1orf159Q96HA4 380 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 USMG5Q96IX5 58 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 FNDC1Q4ZHG4 1894 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-220ENST00000529526 DKK1O94907 266 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 GAGE13Q4V321 117 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 SMPXQ9UHP9 88 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 TRAV13-1A0A0B4J241 112 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 FAM90A2PQ658T7 463 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 ICE1Q9Y2F5 2266 aa6.57□□□□□ -1.36
CTNND1-220ENST00000529526 ZNF503-AS2A6NEH8 195 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 INSP01308 110 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 PRTN3P24158 256 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 CFHR3Q02985 330 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 Q6ZS49 121 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 MSRB2Q9Y3D2 182 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 AHCTF1Q8WYP5 2266 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 VCYO14598 125 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 MRAPQ8TCY5 172 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms