RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 IL22RA2Q969J5 263 aa9.41□□□□□ -0.9
HIF3A-212ENST00000529205 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
HIF3A-212ENST00000529205 TRGV9Q99603 122 aa9.41□□□□□ -0.9
HIF3A-212ENST00000529205 RTBDNQ9BSG5 229 aaPredicted RBP9.41□□□□□ -0.9
HIF3A-212ENST00000529205 HSPB7Q9UBY9 170 aa9.41□□□□□ -0.9
HIF3A-212ENST00000529205 SLC45A2Q9UMX9 530 aa9.41□□□□□ -0.9
HIF3A-212ENST00000529205 TMEM56-RWDD3S4R434 201 aa9.41□□□□□ -0.9
HIF3A-212ENST00000529205 LRP1BQ9NZR2 4599 aa9.41□□□□□ -0.9
HIF3A-212ENST00000529205 IGKV1D-37A0A075B6S9 117 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 CRYM-AS1A6NIL9 109 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 EREGO14944 169 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-212ENST00000529205 AKR1C4P17516 323 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 AZU1P20160 251 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 KRTAP10-2P60368 255 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 RHOBP62745 196 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 DLK1P80370 383 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 SMCO1Q147U7 214 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 CNPY1Q3B7I2 92 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 TMEM144Q7Z5S9 345 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 BAP18Q8IXM2 172 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 ZNF503Q96F45 646 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 SOSTQ9BQB4 213 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 RBKSQ9H477 322 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 PGPEP1Q9NXJ5 209 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 EXTL2Q9UBQ6 330 aa9.4□□□□□ -0.9
HIF3A-212ENST00000529205 TRAV12-2A0A075B6T6 113 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 PIGBOS1A0A0B4J2F0 54 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 ZNF98A6NK75 572 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 BOLA2-SMG1P6H3BVE0 249 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 M6PRP20645 277 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 FGL1Q08830 312 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 ZNF493Q6ZR52 646 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 ZNF738Q8NE65 137 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 BPIFCQ8NFQ6 507 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 OR1S1Q8NH92 325 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 FRZBQ92765 325 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 UPK3BQ9BT76 320 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 TMEM147Q9BVK8 224 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 NDUFA13Q9P0J0 144 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 PAIP2BQ9ULR5 123 aaKnown RBP9.39□□□□□ -0.91
HIF3A-212ENST00000529205 GPR132Q9UNW8 380 aa9.39□□□□□ -0.91
HIF3A-212ENST00000529205 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
HIF3A-212ENST00000529205 ORM2P19652 201 aa9.38□□□□□ -0.91
HIF3A-212ENST00000529205 RPP30P78346 268 aaKnown RBP9.38□□□□□ -0.91
HIF3A-212ENST00000529205 SSBP1Q04837 148 aaKnown RBP9.38□□□□□ -0.91
HIF3A-212ENST00000529205 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
HIF3A-212ENST00000529205 MCFD2Q8NI22 146 aa9.38□□□□□ -0.91
HIF3A-212ENST00000529205 RXFP4Q8TDU9 374 aa9.38□□□□□ -0.91
HIF3A-212ENST00000529205 SCGB3A2Q96PL1 93 aa9.38□□□□□ -0.91
HIF3A-212ENST00000529205 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
HIF3A-212ENST00000529205 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
HIF3A-212ENST00000529205 NOP10Q9NPE3 64 aaKnown RBP9.38□□□□□ -0.91
HIF3A-212ENST00000529205 TRAV26-1A0A087WT03 109 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 A0A0B4J2A0 478 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 NOL3O60936 208 aaKnown RBP9.37□□□□□ -0.91
HIF3A-212ENST00000529205 ANXA3P12429 323 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 TNFSF8P32971 234 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 MRPS10P82664 201 aaKnown RBP9.37□□□□□ -0.91
HIF3A-212ENST00000529205 CCDC28AQ8IWP9 274 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 LYPD1Q8N2G4 141 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 LRRC20Q8TCA0 184 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 TMEM263Q8WUH6 116 aaKnown RBP9.37□□□□□ -0.91
HIF3A-212ENST00000529205 PRRT1Q99946 306 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 ZNF586Q9NXT0 402 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 SHPKQ9UHJ6 478 aa9.37□□□□□ -0.91
HIF3A-212ENST00000529205 SRPXP78539 464 aa9.36□□□□□ -0.91
HIF3A-212ENST00000529205 HIST1H1AQ02539 215 aaPredicted RBP9.36□□□□□ -0.91
HIF3A-212ENST00000529205 CDPF1Q6NVV7 123 aa9.36□□□□□ -0.91
HIF3A-212ENST00000529205 FAAP20Q6NZ36 180 aa9.36□□□□□ -0.91
HIF3A-212ENST00000529205 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
HIF3A-212ENST00000529205 RNF182Q8N6D2 247 aa9.36□□□□□ -0.91
HIF3A-212ENST00000529205 THAP8Q8NA92 274 aa9.36□□□□□ -0.91
HIF3A-212ENST00000529205 KRTAP1-5Q9BYS1 174 aa9.36□□□□□ -0.91
HIF3A-212ENST00000529205 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
HIF3A-212ENST00000529205 V9GYH0 126 aa9.36□□□□□ -0.91
HIF3A-212ENST00000529205 A0A0J9YY99 117 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 H3BNG1 76 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 H7BYZ3 331 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 IFNA5P01569 189 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 RLN2P04090 185 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 AKAIN1P0CW23 69 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 RPL7P18124 248 aaKnown RBP9.35□□□□□ -0.91
HIF3A-212ENST00000529205 CDKN1BP46527 198 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 RAP2BP61225 183 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 ESRGQ1W209 222 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 IGFL4Q6B9Z1 124 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 LYZL2Q7Z4W2 148 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 CCDC190Q86UF4 302 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
HIF3A-212ENST00000529205 APOBP04114 4563 aaKnown RBP9.34□□□□□ -0.91
HIF3A-212ENST00000529205 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
HIF3A-212ENST00000529205 MED6O75586 246 aa9.34□□□□□ -0.91
HIF3A-212ENST00000529205 OR8A1Q8NGG7 326 aa9.34□□□□□ -0.91
HIF3A-212ENST00000529205 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
HIF3A-212ENST00000529205 CIB3Q96Q77 187 aaPredicted RBP9.34□□□□□ -0.91
HIF3A-212ENST00000529205 SDHCQ99643 169 aaPredicted RBP9.34□□□□□ -0.91
HIF3A-212ENST00000529205 C20orf144Q9BQM9 153 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms