RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 ZNF833PQ6ZTB9 187 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 KLHDC3Q9BQ90 382 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 REG4Q9BYZ8 158 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 KNL1Q8NG31 2342 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 PRB4P10163 310 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-219ENST00000528621 NTF4P34130 210 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 UBE2E1P51965 193 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 KLHL30-AS1Q8NEE0 82 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 HIST1H2BLQ99880 126 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 RNF114Q9Y508 228 aa6.91□□□□□ -1.3
CTNND1-219ENST00000528621 TRGV1A0A0A0MS02 117 aa6.9□□□□□ -1.3
CTNND1-219ENST00000528621 TDGF1P3P51864 188 aa6.9□□□□□ -1.3
CTNND1-219ENST00000528621 FRMPD3Q5JV73 1810 aa6.9□□□□□ -1.3
CTNND1-219ENST00000528621 E7EQL1 145 aa6.9□□□□□ -1.3
CTNND1-219ENST00000528621 NCR2O95944 276 aa6.9□□□□□ -1.3
CTNND1-219ENST00000528621 FHL1Q13642 323 aa6.9□□□□□ -1.3
CTNND1-219ENST00000528621 NUP35Q8NFH5 326 aa6.9□□□□□ -1.3
CTNND1-219ENST00000528621 FCN3O75636 299 aa6.9□□□□□ -1.31
CTNND1-219ENST00000528621 YPEL3P61236 119 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-219ENST00000528621 ERCC8Q13216 396 aa6.9□□□□□ -1.31
CTNND1-219ENST00000528621 CD300EQ496F6 205 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-219ENST00000528621 Q86TA4 180 aa6.9□□□□□ -1.31
CTNND1-219ENST00000528621 ASCC3Q8N3C0 2202 aaKnown RBP6.9□□□□□ -1.31
CTNND1-219ENST00000528621 MYOFQ9NZM1 2061 aa6.9□□□□□ -1.31
CTNND1-219ENST00000528621 J3QLI3 93 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 FAM90A2PQ658T7 463 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 LCNL1Q6ZST4 164 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 ERG28Q9UKR5 140 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 FAM231BA6NCW3 169 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 SRRM4A7MD48 611 aaKnown RBP6.89□□□□□ -1.31
CTNND1-219ENST00000528621 K7ENP7 123 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 DAZ1Q9NQZ3 744 aaKnown RBP6.89□□□□□ -1.31
CTNND1-219ENST00000528621 LSM4Q9Y4Z0 139 aaKnown RBP6.89□□□□□ -1.31
CTNND1-219ENST00000528621 DOCK3Q8IZD9 2030 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 PLXNA4Q9HCM2 1894 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 CEACAM8P31997 349 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-219ENST00000528621 PCP4P48539 62 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 RNF144BQ7Z419 303 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 RPP25LQ8N5L8 163 aaKnown RBP6.89□□□□□ -1.31
CTNND1-219ENST00000528621 TDRD6O60522 2096 aaKnown RBP6.89□□□□□ -1.31
CTNND1-219ENST00000528621 DOCK6Q96HP0 2047 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 A8MWV9 139 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 ZNF876PQ49A33 203 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 LINC00311Q8N616 119 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 KIAA0100Q14667 2235 aaKnown RBP6.89□□□□□ -1.31
CTNND1-219ENST00000528621 NDUFS6O75380 124 aaKnown RBP6.89□□□□□ -1.31
CTNND1-219ENST00000528621 SAA4P35542 130 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 CSTL1Q9H114 145 aa6.89□□□□□ -1.31
CTNND1-219ENST00000528621 PLXNA2O75051 1894 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 CT83Q5H943 113 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 SAMD5Q5TGI4 173 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 BPESC1Q9GZL8 116 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 ZNF581Q9P0T4 197 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 LINC01619G3V211 115 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 C1orf194Q5T5A4 169 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 TEX36Q5VZQ5 186 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 RUSC1-AS1Q66K80 236 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 C5orf24Q7Z6I8 188 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 TMEM14BQ9NUH8 114 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 VWA8A3KMH1 1905 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 GGTLC3B5MD39 225 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 SP5Q6BEB4 398 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-219ENST00000528621 TRPT1Q86TN4 253 aaKnown RBP6.88□□□□□ -1.31
CTNND1-219ENST00000528621 RHPN1-AS1Q9BWJ2 59 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 NPC2P61916 151 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 KLF17Q5JT82 389 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-219ENST00000528621 MYO7AQ13402 2215 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 IGHV3-53P01767 116 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 ZNF562Q6V9R5 426 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 Q8TAT8 98 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 TMEM141Q96I45 108 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 ZNF479Q96JC4 524 aa6.88□□□□□ -1.31
CTNND1-219ENST00000528621 CST9LQ9H4G1 147 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 MSMBP08118 114 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 TMEM249Q2WGJ8 235 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 IGFL4Q6B9Z1 124 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 IL17RELQ6ZVW7 336 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 TICRRQ7Z2Z1 1910 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 A0A087WX48 190 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 IGHV2-70DA0A0C4DH43 119 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 A6NNC1 897 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 NDUFA4L2Q9NRX3 87 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 TMEM14CQ9P0S9 112 aa6.87□□□□□ -1.31
CTNND1-219ENST00000528621 GAGE13Q4V321 117 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 SS18Q15532 418 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 IGHV1-69DA0A0B4J2H0 117 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 A0A0G2JRQ6 117 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 IGHV1-69P01742 117 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 CKAP5Q14008 2032 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 LY6G6EA0A0G2JKS1 128 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 LEPROTO15243 131 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 C8orf31Q8N9H6 132 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 U3KQA8 63 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 LGALS1P09382 135 aaKnown RBP6.86□□□□□ -1.31
CTNND1-219ENST00000528621 Q0VG73 95 aa6.86□□□□□ -1.31
CTNND1-219ENST00000528621 GATD1Q8NB37 220 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms