RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 RNF11Q9Y3C5 154 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 MRPS16Q9Y3D3 137 aaKnown RBP3.69□□□□□ -1.82
PCF11-202ENST00000528336 DMXL2Q8TDJ6 3036 aa3.69□□□□□ -1.82
PCF11-202ENST00000528336 PKD1L2Q7Z442 2459 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 CELSR3Q9NYQ7 3312 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 ANKRD12Q6UB98 2062 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 IGLV3-12A0A075B6K2 115 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 IGKV1-6A0A0C4DH72 117 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 INS-IGF2F8WCM5 200 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 H7BYZ3 331 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 COX7A2LO14548 114 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 OVOL1O14753 267 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 INSP01308 110 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 IGKV1-39P01597 117 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 STATHP02808 62 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 IGKV1D-39P04432 117 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 IGKV3-11P04433 115 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 IFNA4P05014 189 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 S100A8P05109 93 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 BCL2P10415 239 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 ZNF823P16415 610 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 RBP2P50120 134 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 HIST1H1AQ02539 215 aaPredicted RBP3.68□□□□□ -1.82
PCF11-202ENST00000528336 DEFB134Q4QY38 66 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 GLT8D1Q68CQ7 371 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 WDR86Q86TI4 376 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 LHFPL1Q86WI0 220 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 KRTCAP2Q8N6L1 136 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 C2orf50Q96LR7 162 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 MND1Q9BWT6 205 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 LINC00470Q9BZP3 86 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 WDR61Q9GZS3 305 aaKnown RBP3.68□□□□□ -1.82
PCF11-202ENST00000528336 FGF23Q9GZV9 251 aaPredicted RBP3.68□□□□□ -1.82
PCF11-202ENST00000528336 C11orf68Q9H3H3 251 aaKnown RBP3.68□□□□□ -1.82
PCF11-202ENST00000528336 NAT8BQ9UHF3 227 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 WDFY3Q8IZQ1 3526 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 SNRNP200O75643 2136 aaKnown RBP3.68□□□□□ -1.82
PCF11-202ENST00000528336 SEC16AO15027 2179 aa3.68□□□□□ -1.82
PCF11-202ENST00000528336 HEATR5BQ9P2D3 2071 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 MAP1BP46821 2468 aaKnown RBP3.67□□□□□ -1.82
PCF11-202ENST00000528336 ZZEF1O43149 2961 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 USP24Q9UPU5 2620 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 URB1O60287 2271 aaKnown RBP3.67□□□□□ -1.82
PCF11-202ENST00000528336 J3QRK9 145 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 TP53I11O14683 189 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 KLF7O75840 302 aaPredicted RBP3.67□□□□□ -1.82
PCF11-202ENST00000528336 OR2H2O95918 312 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 CXorf1O96002 111 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 ADRA2AP08913 450 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 SEC11BP0C7V7 166 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 SMIM17P0DL12 118 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 P0DMU3 169 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 FAM231AP0DMU4 169 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 FAM231CP0DMU5 169 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 CXCL5P42830 114 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 FOXA1P55317 472 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 DEFA3P59666 94 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 FGF12P61328 243 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 HRCT1Q6UXD1 115 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 ZCCHC23Q6ZST2 131 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 BAP18Q8IXM2 172 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 ISOC1Q96CN7 298 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 AICDAQ9GZX7 198 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 OR2D2Q9H210 308 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 RPP21Q9H633 154 aaKnown RBP3.67□□□□□ -1.82
PCF11-202ENST00000528336 KLK12Q9UKR0 248 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 DNAJC15Q9Y5T4 150 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 SDK2Q58EX2 2172 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 DSCAML1Q8TD84 2053 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 CFAP47Q6ZTR5 3102 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 ARHGAP21Q5T5U3 1957 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 SPTBP11277 2137 aa3.67□□□□□ -1.82
PCF11-202ENST00000528336 PCM1Q15154 2024 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 IGHV3OR15-7A0A075B7D8 119 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 ZNF860A6NHJ4 632 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 CLDN25C9JDP6 229 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 SSR2P43308 183 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 NMUP48645 174 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 ZNF136P52737 540 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 CRISP3P54108 245 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 TAS2R30P59541 319 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 TAF9Q16594 264 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 DNLZQ5SXM8 178 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 Q5XG85 94 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 LAIR2Q6ISS4 152 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 COMMD6Q7Z4G1 85 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 PDPNQ86YL7 162 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 GPHB5Q86YW7 130 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 PDZD9Q8IXQ8 264 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 ORMDL3Q8N138 153 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 OR5W2Q8NH69 310 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 TOMM6Q96B49 74 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 SPIN2AQ99865 258 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 SPIN2BQ9BPZ2 258 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 OR8D2Q9GZM6 311 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 C8orf17Q9NRJ1 99 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 GNG8Q9UK08 70 aa3.66□□□□□ -1.82
PCF11-202ENST00000528336 DSPP15924 2871 aaKnown RBP3.66□□□□□ -1.82
PCF11-202ENST00000528336 PTPRQQ9UMZ3 2332 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms