RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SELENOTP62341 195 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 C4orf46Q504U0 113 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 GDF5OSQ5U4N7 250 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 TMEM14EPQ6UXP3 125 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 TMEM182Q6ZP80 229 aaPredicted RBP7.54□□□□□ -1.2
CPSF1-203ENST00000527916 OR1B1Q8NGR6 318 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 LINC00052Q96N35 136 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 XCL2Q9UBD3 114 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 LRP1BQ9NZR2 4599 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 LINC00854A0A1B0GVQ3 168 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 A8MTW9 85 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 ZNF705FA8MVS1 300 aaPredicted RBP7.53□□□□□ -1.2
CPSF1-203ENST00000527916 H3BP45 60 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 K7EPK0 472 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 PLA2G10O15496 165 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 TSC22D2O75157 780 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 ZNF705DP0CH99 300 aaPredicted RBP7.53□□□□□ -1.2
CPSF1-203ENST00000527916 ZNF705BP0CI00 300 aaPredicted RBP7.53□□□□□ -1.2
CPSF1-203ENST00000527916 ANXA7P20073 488 aaKnown RBP7.53□□□□□ -1.2
CPSF1-203ENST00000527916 DLK1P80370 383 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 AKR1C1Q04828 323 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 EBLN2Q6P2I7 272 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 CYP2G1PQ6ZSU1 146 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 ACOT7LQ6ZUV0 252 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 S100A7AQ86SG5 101 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 OR10P1Q8NGE3 313 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 TMEM147Q9BVK8 224 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 SLC25A32Q9H2D1 315 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 NPVFQ9HCQ7 196 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 SCRT2Q9NQ03 307 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 RPRMQ9NS64 109 aa7.53□□□□□ -1.2
CPSF1-203ENST00000527916 A0A0J9YX75 114 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 TMEM189A5PLL7 270 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 LYRM1O43325 122 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 SSSCA1O60232 199 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 IL5P05113 134 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 ORM2P19652 201 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 GATA2P23769 480 aaPredicted RBP7.52□□□□□ -1.21
CPSF1-203ENST00000527916 PSG9Q00887 426 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 IAH1Q2TAA2 248 aaPredicted RBP7.52□□□□□ -1.21
CPSF1-203ENST00000527916 LINC00299Q6ZSB3 139 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 ZNF709Q8N972 641 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 ZBTB8BQ8NAP8 495 aaPredicted RBP7.52□□□□□ -1.21
CPSF1-203ENST00000527916 C16orf92Q96LL3 132 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 C17orf77Q96MU5 243 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 RSG1Q9BU20 258 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 GGACTQ9BVM4 153 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 SLC25A39Q9BZJ4 359 aaPredicted RBP7.52□□□□□ -1.21
CPSF1-203ENST00000527916 SLC25A22Q9H936 323 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 RNF24Q9Y225 148 aa7.52□□□□□ -1.21
CPSF1-203ENST00000527916 SRRM2Q9UQ35 2752 aaKnown RBP7.51□□□□□ -1.21
CPSF1-203ENST00000527916 H3BRN7 92 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 HYPMO75409 117 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 TCRBP04435 133 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 METTL15P1P0C7V9 234 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 RPL7P18124 248 aaKnown RBP7.51□□□□□ -1.21
CPSF1-203ENST00000527916 RAP2BP61225 183 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 C12orf74Q32Q52 190 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 PXDC1Q5TGL8 231 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 FAM78BQ5VT40 261 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 TEPPQ6URK8 271 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 OR4B1Q8NGF8 309 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 FAM210BQ96KR6 192 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 SHANK2-AS3Q9BTD1 123 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 C20orf85Q9H1P6 137 aa7.51□□□□□ -1.21
CPSF1-203ENST00000527916 APOBP04114 4563 aaKnown RBP7.5□□□□□ -1.21
CPSF1-203ENST00000527916 SMCO3A2RU48 225 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 C7orf66A4D0T2 115 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 IGKV3-20P01619 116 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 MBPP02686 304 aaPredicted RBP7.5□□□□□ -1.21
CPSF1-203ENST00000527916 LINC00869P0C866 280 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 SPART-AS1P0CW21 52 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 DEFB1P60022 68 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 RNF212Q495C1 297 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 ZNF767PQ75MW2 155 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 C20orf173Q96LM9 149 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 CCDC32Q9BV29 185 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 GSKIPQ9P0R6 139 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 DOK5Q9P104 306 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 MGAT4CQ9UBM8 478 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 CELA1Q9UNI1 258 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 HIGD1AQ9Y241 93 aa7.5□□□□□ -1.21
CPSF1-203ENST00000527916 RCL1Q9Y2P8 373 aaKnown RBP7.5□□□□□ -1.21
CPSF1-203ENST00000527916 A0A087X0K7 114 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 TEX48A0A1B0GUV7 120 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 F6UB75 175 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 CCNKO75909 580 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 DUSP14O95147 198 aaKnown RBP7.49□□□□□ -1.21
CPSF1-203ENST00000527916 SCGB1D2O95969 90 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 RRAS2P62070 204 aaPredicted RBP7.49□□□□□ -1.21
CPSF1-203ENST00000527916 AMTNQ6UX39 209 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 C1orf158Q8N1D5 194 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 ZNF431Q8TF32 576 aaPredicted RBP7.49□□□□□ -1.21
CPSF1-203ENST00000527916 SCRT1Q9BWW7 348 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 SLC35B3Q9H1N7 401 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 GOLT1BQ9Y3E0 138 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 RFNGQ9Y644 331 aa7.49□□□□□ -1.21
CPSF1-203ENST00000527916 TRAV8-2A0A0B4J237 113 aa7.48□□□□□ -1.21
CPSF1-203ENST00000527916 GOSR2O14653 212 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms