RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 CCR6P51684 374 aa13.26□□□□□ -0.29
CAPN1-206ENST00000526966 ATP5IP56385 69 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-206ENST00000526966 SMCO1Q147U7 214 aa13.26□□□□□ -0.29
CAPN1-206ENST00000526966 C1orf134Q5TEV5 83 aa13.26□□□□□ -0.29
CAPN1-206ENST00000526966 FAM78BQ5VT40 261 aa13.26□□□□□ -0.29
CAPN1-206ENST00000526966 TMEM88Q6PEY1 159 aa13.26□□□□□ -0.29
CAPN1-206ENST00000526966 TCTE3Q8IZS6 198 aa13.26□□□□□ -0.29
CAPN1-206ENST00000526966 RBKSQ9H477 322 aa13.26□□□□□ -0.29
CAPN1-206ENST00000526966 SHPKQ9UHJ6 478 aa13.26□□□□□ -0.29
CAPN1-206ENST00000526966 LYZP61626 148 aa13.25□□□□□ -0.29
CAPN1-206ENST00000526966 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
CAPN1-206ENST00000526966 SAMD13Q5VXD3 122 aa13.25□□□□□ -0.29
CAPN1-206ENST00000526966 EBLN2Q6P2I7 272 aa13.25□□□□□ -0.29
CAPN1-206ENST00000526966 GSG1LQ6UXU4 331 aa13.25□□□□□ -0.29
CAPN1-206ENST00000526966 ST6GAL2Q96JF0 529 aa13.25□□□□□ -0.29
CAPN1-206ENST00000526966 SLC35E1Q96K37 410 aa13.25□□□□□ -0.29
CAPN1-206ENST00000526966 NDUFB6O95139 128 aa13.24□□□□□ -0.29
CAPN1-206ENST00000526966 FABP1P07148 127 aa13.24□□□□□ -0.29
CAPN1-206ENST00000526966 FAM3BP58499 235 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-206ENST00000526966 MARVELD1Q9BSK0 173 aa13.24□□□□□ -0.29
CAPN1-206ENST00000526966 KCNIP3Q9Y2W7 256 aa13.24□□□□□ -0.29
CAPN1-206ENST00000526966 FAM240BA0A1B0GVZ2 78 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 SNRPGP15A8MWD9 76 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 MEOX2P50222 304 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 DAD1P61803 113 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 AMTNQ6UX39 209 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 LYZL2Q7Z4W2 148 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 OR8I2Q8N0Y5 310 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 C15orf53Q8NAA6 179 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 C20orf173Q96LM9 149 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 TRGV9Q99603 122 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 RPRMQ9NS64 109 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 DOK5Q9P104 306 aa13.23□□□□□ -0.29
CAPN1-206ENST00000526966 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
CAPN1-206ENST00000526966 IGF2BP2-AS1Q96M15 143 aa13.22□□□□□ -0.29
CAPN1-206ENST00000526966 C17orf77Q96MU5 243 aa13.22□□□□□ -0.29
CAPN1-206ENST00000526966 OR2F1Q13607 317 aa13.21□□□□□ -0.29
CAPN1-206ENST00000526966 THAP8Q8NA92 274 aa13.21□□□□□ -0.29
CAPN1-206ENST00000526966 MAGT1Q9H0U3 335 aa13.21□□□□□ -0.29
CAPN1-206ENST00000526966 TCRBP04435 133 aa13.2□□□□□ -0.3
CAPN1-206ENST00000526966 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
CAPN1-206ENST00000526966 SLC25A32Q9H2D1 315 aa13.2□□□□□ -0.3
CAPN1-206ENST00000526966 SLC45A2Q9UMX9 530 aa13.2□□□□□ -0.3
CAPN1-206ENST00000526966 TMED3Q9Y3Q3 217 aa13.2□□□□□ -0.3
CAPN1-206ENST00000526966 PITX3O75364 302 aa13.19□□□□□ -0.3
CAPN1-206ENST00000526966 GALR1P47211 349 aa13.19□□□□□ -0.3
CAPN1-206ENST00000526966 SRPXP78539 464 aa13.19□□□□□ -0.3
CAPN1-206ENST00000526966 TMEM128Q5BJH2 165 aa13.19□□□□□ -0.3
CAPN1-206ENST00000526966 OR1S1Q8NH92 325 aa13.19□□□□□ -0.3
CAPN1-206ENST00000526966 APOBP04114 4563 aaKnown RBP13.18□□□□□ -0.3
CAPN1-206ENST00000526966 LYRM9A8MSI8 78 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 CRXO43186 299 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-206ENST00000526966 CFDP00746 253 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-206ENST00000526966 C1QBP02746 253 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 AKR1C4P17516 323 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 UBE2MP61081 183 aaKnown RBP13.18□□□□□ -0.3
CAPN1-206ENST00000526966 RAB11AP62491 216 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 TNP2Q05952 138 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 TMEM208Q9BTX3 173 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 C20orf85Q9H1P6 137 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 FLVCR2Q9UPI3 526 aa13.18□□□□□ -0.3
CAPN1-206ENST00000526966 DUXBA0A1W2PPF3 345 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 ZNF98A6NK75 572 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 PRSS46E5RG02 174 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 INMT-MINDY4F8WBC2 141 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 CDK2AP2O75956 126 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 ANXA3P12429 323 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 TSPOP30536 169 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
CAPN1-206ENST00000526966 IFITM2Q01629 132 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 GGNBP1Q5YKI7 109 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 OR11H7Q8NGC8 314 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 OR4D5Q8NGN0 318 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 ZNRF2Q8NHG8 242 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 RSG1Q9BU20 258 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 SLC25A22Q9H936 323 aa13.17□□□□□ -0.3
CAPN1-206ENST00000526966 NBDYA0A0U1RRE5 68 aa13.16□□□□□ -0.3
CAPN1-206ENST00000526966 C7orf66A4D0T2 115 aa13.16□□□□□ -0.3
CAPN1-206ENST00000526966 ZNF705GA8MUZ8 300 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-206ENST00000526966 INSP01308 110 aa13.16□□□□□ -0.3
CAPN1-206ENST00000526966 PRM2P04554 102 aa13.16□□□□□ -0.3
CAPN1-206ENST00000526966 IAPPP10997 89 aa13.16□□□□□ -0.3
CAPN1-206ENST00000526966 RRAS2P62070 204 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-206ENST00000526966 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
CAPN1-206ENST00000526966 NUDT15Q9NV35 164 aa13.16□□□□□ -0.3
CAPN1-206ENST00000526966 ALG5Q9Y673 324 aa13.16□□□□□ -0.3
CAPN1-206ENST00000526966 PIGBOS1A0A0B4J2F0 54 aa13.15□□□□□ -0.3
CAPN1-206ENST00000526966 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
CAPN1-206ENST00000526966 C16orf90A8MZG2 172 aa13.15□□□□□ -0.3
CAPN1-206ENST00000526966 M0R2Z0 102 aa13.15□□□□□ -0.3
CAPN1-206ENST00000526966 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
CAPN1-206ENST00000526966 B2MP61769 119 aa13.15□□□□□ -0.3
CAPN1-206ENST00000526966 SPINK13Q1W4C9 94 aa13.15□□□□□ -0.3
CAPN1-206ENST00000526966 OR1B1Q8NGR6 318 aa13.15□□□□□ -0.3
CAPN1-206ENST00000526966 GPR82Q96P67 336 aa13.15□□□□□ -0.3
CAPN1-206ENST00000526966 TRAV6A0A075B6T7 132 aa13.14□□□□□ -0.31
CAPN1-206ENST00000526966 TRAV8-2A0A0B4J237 113 aa13.14□□□□□ -0.31
CAPN1-206ENST00000526966 H2AFB2P0C5Z0 115 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms