RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 C16orf54Q6UWD8 224 aa16.07■□□□□ 0.16
SMIM3-201ENST00000526627 OR4B1Q8NGF8 309 aa16.07■□□□□ 0.16
SMIM3-201ENST00000526627 OR2D3Q8NGH3 330 aa16.07■□□□□ 0.16
SMIM3-201ENST00000526627 TIMD4Q96H15 378 aa16.07■□□□□ 0.16
SMIM3-201ENST00000526627 URB1-AS1Q96HZ7 61 aa16.07■□□□□ 0.16
SMIM3-201ENST00000526627 PGLYRP4Q96LB8 373 aa16.07■□□□□ 0.16
SMIM3-201ENST00000526627 GFRA4Q9GZZ7 299 aa16.07■□□□□ 0.16
SMIM3-201ENST00000526627 LOC105371242A0A075B767 164 aa16.06■□□□□ 0.16
SMIM3-201ENST00000526627 OVOL3O00110 214 aa16.06■□□□□ 0.16
SMIM3-201ENST00000526627 MRPS12O15235 138 aaKnown RBP16.06■□□□□ 0.16
SMIM3-201ENST00000526627 TOX4O94842 621 aa16.06■□□□□ 0.16
SMIM3-201ENST00000526627 PRTN3P24158 256 aa16.06■□□□□ 0.16
SMIM3-201ENST00000526627 RAXQ9Y2V3 346 aa16.06■□□□□ 0.16
SMIM3-201ENST00000526627 TRBV6-1A0A0K0K1D8 114 aa16.06■□□□□ 0.16
SMIM3-201ENST00000526627 SOX21Q9Y651 276 aaPredicted RBP16.06■□□□□ 0.16
SMIM3-201ENST00000526627 TACC2O95359 2948 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 A0A1W2PRD5 423 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 A0A1W2PRF3 423 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 A0A1W2PRM7 423 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 C5orf64Q2M2E5 130 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 SIGLEC15Q6ZMC9 328 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 PRNTQ86SH4 94 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 FANCD2OSQ96PS1 177 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 S4R3C0 116 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 WI2-2373I1.2A0A1W2PRP0 233 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 CEACAM3P40198 252 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 KLRB1Q12918 225 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 RBPMS2Q6ZRY4 209 aaKnown RBP16.05■□□□□ 0.16
SMIM3-201ENST00000526627 MRPL52Q86TS9 123 aaKnown RBP16.05■□□□□ 0.16
SMIM3-201ENST00000526627 BCL6BQ8N143 479 aaPredicted RBP16.05■□□□□ 0.16
SMIM3-201ENST00000526627 DAZAP1Q96EP5 407 aaKnown RBP16.05■□□□□ 0.16
SMIM3-201ENST00000526627 RNF125Q96EQ8 232 aa16.05■□□□□ 0.16
SMIM3-201ENST00000526627 BPIFA4PQ86YQ2 179 aa16.04■□□□□ 0.16
SMIM3-201ENST00000526627 DYNAPQ8N1N2 210 aa16.04■□□□□ 0.16
SMIM3-201ENST00000526627 HSBP1O75506 76 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 FOSL1P15407 271 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 IGLV11-55A0A075B6I3 123 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 FAM231BA6NCW3 169 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 TCAPO15273 167 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 HLA-DRB1P01911 266 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 APOHP02749 345 aaPredicted RBP16.03■□□□□ 0.16
SMIM3-201ENST00000526627 IL4P05112 153 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 NDPQ00604 133 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 NEU4Q8WWR8 484 aaPredicted RBP16.03■□□□□ 0.16
SMIM3-201ENST00000526627 BORCS7Q96B45 105 aa16.03■□□□□ 0.16
SMIM3-201ENST00000526627 F8W735 103 aaPredicted RBP16.02■□□□□ 0.16
SMIM3-201ENST00000526627 COL8A1P27658 744 aa16.02■□□□□ 0.16
SMIM3-201ENST00000526627 SPATA45Q537H7 98 aa16.02■□□□□ 0.16
SMIM3-201ENST00000526627 LCN12Q6JVE5 192 aa16.02■□□□□ 0.16
SMIM3-201ENST00000526627 EBLN2Q6P2I7 272 aa16.02■□□□□ 0.16
SMIM3-201ENST00000526627 RNASEKQ6P5S7 137 aaKnown RBP16.02■□□□□ 0.16
SMIM3-201ENST00000526627 FAM181BA6NEQ2 426 aa16.02■□□□□ 0.15
SMIM3-201ENST00000526627 HES1Q14469 280 aa16.02■□□□□ 0.15
SMIM3-201ENST00000526627 TMEM75Q8N9X5 138 aa16.02■□□□□ 0.15
SMIM3-201ENST00000526627 OR4F17Q8NGA8 305 aa16.02■□□□□ 0.15
SMIM3-201ENST00000526627 ZC2HC1AQ96GY0 325 aa16.02■□□□□ 0.15
SMIM3-201ENST00000526627 NPIPB5A8MRT5 1133 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 PRB4P10163 310 aaPredicted RBP16.01■□□□□ 0.15
SMIM3-201ENST00000526627 ZNF414Q96IQ9 312 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 ASCL2Q99929 193 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 SPTA1P02549 2419 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 M0QZK8 103 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 M0R2Z0 102 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 FCGR2BP31994 310 aaPredicted RBP16.01■□□□□ 0.15
SMIM3-201ENST00000526627 ZNF562Q6V9R5 426 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 LYPD1Q8N2G4 141 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 RNF24Q9Y225 148 aa16.01■□□□□ 0.15
SMIM3-201ENST00000526627 HRNRQ86YZ3 2850 aaPredicted RBP16■□□□□ 0.15
SMIM3-201ENST00000526627 C2orf70A6NJV1 201 aa16■□□□□ 0.15
SMIM3-201ENST00000526627 UCNP55089 124 aa16■□□□□ 0.15
SMIM3-201ENST00000526627 FOXA3P55318 350 aaPredicted RBP16■□□□□ 0.15
SMIM3-201ENST00000526627 Q8N6K4 173 aa16■□□□□ 0.15
SMIM3-201ENST00000526627 TMEM190Q8WZ59 177 aa16■□□□□ 0.15
SMIM3-201ENST00000526627 FAM120AOSQ5T036 256 aa16■□□□□ 0.15
SMIM3-201ENST00000526627 ZNF48Q96MX3 618 aaPredicted RBP16■□□□□ 0.15
SMIM3-201ENST00000526627 M0QZ24 198 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 HAX1O00165 279 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 GNG7O60262 68 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 VMO1Q7Z5L0 202 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 KIR3DL3Q8N743 410 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 ARPC1AQ92747 370 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 PSG8Q9UQ74 426 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 A0A1W2PPR1 153 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 ZFP36P26651 326 aaKnown RBP15.99■□□□□ 0.15
SMIM3-201ENST00000526627 CRIP1P50238 77 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 TTC9CQ8N5M4 171 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 ZFP30Q9Y2G7 519 aa15.99■□□□□ 0.15
SMIM3-201ENST00000526627 TRAV30A0A087WSZ9 112 aa15.98■□□□□ 0.15
SMIM3-201ENST00000526627 SH2D7A6NKC9 451 aaPredicted RBP15.98■□□□□ 0.15
SMIM3-201ENST00000526627 IGLC3P0DOY3 106 aa15.98■□□□□ 0.15
SMIM3-201ENST00000526627 MFAP4P55083 255 aa15.98■□□□□ 0.15
SMIM3-201ENST00000526627 PSG3Q16557 428 aa15.98■□□□□ 0.15
SMIM3-201ENST00000526627 C1orf122Q6ZSJ8 110 aa15.98■□□□□ 0.15
SMIM3-201ENST00000526627 DTX2Q86UW9 622 aa15.98■□□□□ 0.15
SMIM3-201ENST00000526627 ATOH7Q8N100 152 aa15.98■□□□□ 0.15
SMIM3-201ENST00000526627 LOC102724200A0A096LPH7 203 aaPredicted RBP15.97■□□□□ 0.15
SMIM3-201ENST00000526627 M0R3E3 92 aa15.97■□□□□ 0.15
SMIM3-201ENST00000526627 MAJINQ3KP22 176 aa15.97■□□□□ 0.15
SMIM3-201ENST00000526627 SPATA12Q7Z6I5 190 aa15.97■□□□□ 0.15
SMIM3-201ENST00000526627 EBI3Q14213 229 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms