RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 HIVEP2P31629 2446 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 HIVEP1P15822 2718 aa3.42□□□□□ -1.86
USP48-211ENST00000526044 PLXNB1O43157 2135 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 ZFHX3Q15911 3703 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 ZANQ9Y493 2812 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 NOTCH2Q04721 2471 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 IGLV7-46A0A075B6I9 117 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 A0A1B0GUS0 222 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 A0A1B0GW15 77 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 A0A1B0GW64 132 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 IGLC7A0M8Q6 106 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 PSMB11A5LHX3 300 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 H7C423 109 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 K7EPK0 472 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 SSSCA1O60232 199 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 CCNKO75909 580 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 OR2J3O76001 311 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 MPC2O95563 127 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 IFNA10P01566 189 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 REG1AP05451 166 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 GIPP09681 153 aaPredicted RBP3.41□□□□□ -1.86
USP48-211ENST00000526044 RD3LP0DJH9 198 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 IAPPP10997 89 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 CTRB1P17538 263 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 PAX9P55771 341 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 TAS2R30P59541 319 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 S100A10P60903 97 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 WT1-ASQ06250 92 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 ECSCRQ19T08 205 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 SPANXN5Q5MJ07 72 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 CTRB2Q6GPI1 263 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 OR5AU1Q8NGC0 362 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 OR2T35Q8NGX2 323 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 LINC01006Q8NI28 216 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 PPP1R1CQ8WVI7 109 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 RNF126Q9BV68 326 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 THYN1Q9P016 225 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 PAIP2BQ9ULR5 123 aaKnown RBP3.41□□□□□ -1.86
USP48-211ENST00000526044 RCL1Q9Y2P8 373 aaKnown RBP3.41□□□□□ -1.86
USP48-211ENST00000526044 FBXO7Q9Y3I1 522 aa3.41□□□□□ -1.86
USP48-211ENST00000526044 PUS1Q9Y606 427 aaKnown RBP eCLIP3.41□□□□□ -1.86
USP48-211ENST00000526044 SETXQ7Z333 2677 aaKnown RBP3.41□□□□□ -1.86
USP48-211ENST00000526044 A0A0G2JLM5 398 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 FAM24AA6NFZ4 105 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 H3BUA1 57 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 CORTO00230 105 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 SNAI2O43623 268 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 PFDN1O60925 122 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 DEDDO75618 318 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 IGHG4P01861 327 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 PRH1P02810 166 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 TRGV3P03979 118 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 IFNA4P05014 189 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 PET100P0DJ07 73 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 RNASE2P10153 161 aaKnown RBP3.4□□□□□ -1.87
USP48-211ENST00000526044 SLC25A4P12235 298 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 HIST1H1BP16401 226 aaKnown RBP3.4□□□□□ -1.87
USP48-211ENST00000526044 MDKP21741 143 aaPredicted RBP3.4□□□□□ -1.87
USP48-211ENST00000526044 GPX4P36969 197 aaPredicted RBP3.4□□□□□ -1.87
USP48-211ENST00000526044 P2RY1P47900 373 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 CAV2P51636 162 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 NDPQ00604 133 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 C2orf83Q53S99 150 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 Q5BKY6 102 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 PRSS54Q6PEW0 395 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 ZNF546Q86UE3 836 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 AKAP14Q86UN6 197 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 KLHDC1Q8N7A1 406 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.4□□□□□ -1.87
USP48-211ENST00000526044 INO80EQ8NBZ0 244 aaPredicted RBP3.4□□□□□ -1.87
USP48-211ENST00000526044 NECAP1Q8NC96 275 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 OR10G8Q8NGN5 311 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 OR1P1Q8NH06 330 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 TMEM158Q8WZ71 300 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 P2RX4Q99571 388 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 SLC25A31Q9H0C2 315 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 ZC4H2Q9NQZ6 224 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 TECRQ9NZ01 308 aaKnown RBP3.4□□□□□ -1.87
USP48-211ENST00000526044 OR5AC2Q9NZP5 309 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
USP48-211ENST00000526044 SVEP1Q4LDE5 3571 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 NAV3Q8IVL0 2385 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 TNCP24821 2201 aa3.4□□□□□ -1.87
USP48-211ENST00000526044 IGLV11-55A0A075B6I3 123 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 TRAV14DV4A0A0A6YYC5 116 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 TRBV9A0A0B4J1U6 114 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 TCRBV4S1A1TA0A5B7 111 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 FAM223BA6NKX1 122 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 H3BP45 60 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 SOX15O60248 233 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 CDK2AP2O75956 126 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 TMEM50AO95807 157 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 OR8U8P0C7N1 319 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 METTL15P1P0C7V9 234 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 NPY1RP25929 384 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 PSMB8P28062 276 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 RPL12P30050 165 aaKnown RBP3.39□□□□□ -1.87
USP48-211ENST00000526044 S100A11P31949 105 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms